Variant report

Variant	rs12136601
Chromosome Location	chr1:165341382-165341383
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs12136025	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28502486	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56375656	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6665237	0.84[AMR][1000 genomes]
rs6665572	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165334400-165344400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr1:165337200-165344600	Weak transcription	Right Atrium	heart
3	chr1:165340000-165342200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:165340400-165341800	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr1:165340400-165342000	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
6	chr1:165340600-165341400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr1:165340600-165341800	Enhancers	Fetal Lung	lung
8	chr1:165340600-165342000	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr1:165340600-165342000	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
10	chr1:165340800-165341400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr1:165340800-165341800	Enhancers	Adipose Nuclei	Adipose
12	chr1:165340800-165345200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr1:165341000-165341600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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