The 2.0 version of rSNPBase

Variant report

Variant rs12152863
Chromosome Location chr5:107203628-107203629
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:107189000-107204000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:107189000-107212200 Weak transcription Fetal Brain Male brain
3 chr5:107194000-107219000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr5:107195200-107214800 Weak transcription Primary B cells from peripheral blood blood
5 chr5:107195400-107204800 Weak transcription Brain Anterior Caudate brain
6 chr5:107195400-107205000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr5:107195400-107207600 Weak transcription Spleen Spleen
8 chr5:107195400-107208600 Weak transcription Brain Hippocampus Middle brain
9 chr5:107195400-107211600 Weak transcription Aorta Aorta
10 chr5:107195400-107214200 Weak transcription Primary B cells from cord blood blood
11 chr5:107195400-107215000 Weak transcription Primary T cells fromperipheralblood blood
12 chr5:107195400-107215000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr5:107195400-107217800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr5:107195400-107220000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr5:107195400-107223200 Weak transcription Left Ventricle heart
16 chr5:107195600-107204600 Weak transcription Fetal Stomach stomach
17 chr5:107195800-107214400 Weak transcription Fetal Intestine Small intestine
18 chr5:107195800-107218200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr5:107196000-107204200 Weak transcription Primary hematopoietic stem cells blood
20 chr5:107196000-107210800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr5:107196800-107205000 Weak transcription HSMM muscle
22 chr5:107196800-107223200 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr5:107197600-107204200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr5:107197600-107215400 Weak transcription Ovary ovary
25 chr5:107197800-107204800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr5:107197800-107210400 Weak transcription Primary T cells from cord blood blood
27 chr5:107197800-107215400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
28 chr5:107197800-107215800 Weak transcription Lung lung
29 chr5:107197800-107219000 Weak transcription Gastric stomach
30 chr5:107197800-107228800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr5:107198000-107223000 Weak transcription Adipose Nuclei Adipose
32 chr5:107198200-107209200 Weak transcription Liver Liver
33 chr5:107198600-107211400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:107200200-107204200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr5:107200400-107203800 Weak transcription Esophagus oesophagus
36 chr5:107200400-107204800 Weak transcription Pancreas Pancrea
37 chr5:107200800-107203800 Weak transcription H9 Cell Line embryonic stem cell
38 chr5:107201000-107203800 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr5:107201000-107204800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr5:107201200-107204200 Weak transcription NHLF lung
41 chr5:107201200-107204400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr5:107201400-107203800 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr5:107201400-107204600 Weak transcription ES-WA7 Cell Line embryonic stem cell
44 chr5:107201800-107204600 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr5:107201800-107205400 Weak transcription Rectal Smooth Muscle rectum
46 chr5:107202200-107205200 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr5:107202800-107205200 Enhancers NHDF-Ad bronchial
48 chr5:107202800-107215800 Weak transcription Fetal Intestine Large intestine
49 chr5:107203200-107205000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr5:107203200-107205400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015