The 2.0 version of rSNPBase

Variant report

Variant rs7708343
Chromosome Location chr5:107205182-107205183
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:107189000-107212200 Weak transcription Fetal Brain Male brain
2 chr5:107194000-107219000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr5:107195200-107214800 Weak transcription Primary B cells from peripheral blood blood
4 chr5:107195400-107207600 Weak transcription Spleen Spleen
5 chr5:107195400-107208600 Weak transcription Brain Hippocampus Middle brain
6 chr5:107195400-107211600 Weak transcription Aorta Aorta
7 chr5:107195400-107214200 Weak transcription Primary B cells from cord blood blood
8 chr5:107195400-107215000 Weak transcription Primary T cells fromperipheralblood blood
9 chr5:107195400-107215000 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr5:107195400-107217800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr5:107195400-107220000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr5:107195400-107223200 Weak transcription Left Ventricle heart
13 chr5:107195800-107214400 Weak transcription Fetal Intestine Small intestine
14 chr5:107195800-107218200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr5:107196000-107210800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr5:107196800-107223200 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr5:107197600-107215400 Weak transcription Ovary ovary
18 chr5:107197800-107210400 Weak transcription Primary T cells from cord blood blood
19 chr5:107197800-107215400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr5:107197800-107215800 Weak transcription Lung lung
21 chr5:107197800-107219000 Weak transcription Gastric stomach
22 chr5:107197800-107228800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr5:107198000-107223000 Weak transcription Adipose Nuclei Adipose
24 chr5:107198200-107209200 Weak transcription Liver Liver
25 chr5:107198600-107211400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr5:107201800-107205400 Weak transcription Rectal Smooth Muscle rectum
27 chr5:107202200-107205200 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr5:107202800-107205200 Enhancers NHDF-Ad bronchial
29 chr5:107202800-107215800 Weak transcription Fetal Intestine Large intestine
30 chr5:107203200-107205400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:107203200-107206000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
32 chr5:107203400-107207800 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr5:107203600-107206000 Enhancers HUES6 Cell Line embryonic stem cell
34 chr5:107203600-107218800 Weak transcription Stomach Smooth Muscle stomach
35 chr5:107203800-107205400 Enhancers iPS-15b Cell Line embryonic stem cell
36 chr5:107203800-107205800 Enhancers HUES48 Cell Line embryonic stem cell
37 chr5:107204000-107205800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr5:107204000-107206200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr5:107204200-107205400 Enhancers H1 Cell Line embryonic stem cell
40 chr5:107204200-107205400 Enhancers Muscle Satellite Cultured Cells --
41 chr5:107204200-107205400 Weak transcription Brain Cingulate Gyrus brain
42 chr5:107204200-107205600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
43 chr5:107204200-107206000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
44 chr5:107204200-107206000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:107204200-107206200 Enhancers Fetal Adrenal Gland Adrenal Gland
46 chr5:107204200-107206200 Enhancers NHLF lung
47 chr5:107204400-107205600 Enhancers Cortex derived primary cultured neurospheres brain
48 chr5:107204400-107206200 Enhancers NH-A brain
49 chr5:107204600-107205200 Enhancers A549 lung
50 chr5:107204600-107205600 Enhancers HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015