The 2.0 version of rSNPBase

Variant report

Variant rs12163543
Chromosome Location chr3:119077802-119077803
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119053200-119087200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:119053400-119087000 Weak transcription Fetal Muscle Trunk muscle
3 chr3:119069400-119111400 Weak transcription Fetal Intestine Small intestine
4 chr3:119071400-119078400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr3:119071600-119087000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr3:119072000-119078400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr3:119072000-119085600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr3:119072000-119086800 Weak transcription HSMMtube muscle
9 chr3:119072000-119109200 Weak transcription Brain Substantia Nigra brain
10 chr3:119072000-119133800 Weak transcription Brain Cingulate Gyrus brain
11 chr3:119072200-119079200 Weak transcription Brain Angular Gyrus brain
12 chr3:119072200-119086000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr3:119072200-119087000 Weak transcription Muscle Satellite Cultured Cells --
14 chr3:119072200-119099200 Weak transcription Fetal Muscle Leg muscle
15 chr3:119072200-119100600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr3:119072200-119101400 Weak transcription HSMM muscle
17 chr3:119072200-119109600 Weak transcription Colon Smooth Muscle Colon
18 chr3:119072200-119114200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr3:119072600-119084200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr3:119072600-119085800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr3:119072800-119078400 Weak transcription H9 Cell Line embryonic stem cell
22 chr3:119073000-119078000 Weak transcription Lung lung
23 chr3:119073000-119078200 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr3:119073000-119078400 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr3:119073000-119078400 Weak transcription Fetal Stomach stomach
26 chr3:119073000-119078600 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr3:119073000-119086800 Weak transcription Primary T cells from cord blood blood
28 chr3:119073000-119098000 Weak transcription Thymus Thymus
29 chr3:119073000-119101000 Weak transcription Primary T cells fromperipheralblood blood
30 chr3:119073200-119078400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr3:119073200-119078400 Weak transcription Placenta Amnion Placenta Amnion
32 chr3:119073200-119086000 Weak transcription Fetal Thymus thymus
33 chr3:119074200-119078400 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr3:119074400-119085000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr3:119076200-119078400 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr3:119076200-119078400 Weak transcription Fetal Kidney kidney
37 chr3:119076200-119078600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
38 chr3:119076200-119084000 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr3:119076400-119078000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr3:119076400-119078000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr3:119076400-119078000 Weak transcription Left Ventricle heart
42 chr3:119076400-119078000 Weak transcription Right Ventricle heart
43 chr3:119076400-119078200 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr3:119076400-119078400 Weak transcription H1 Cell Line embryonic stem cell
45 chr3:119076400-119078400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:119076400-119078400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr3:119076400-119078400 Weak transcription Primary monocytes fromperipheralblood blood
48 chr3:119076400-119078400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr3:119076400-119078400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr3:119076400-119078400 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015