Variant report

Variant rs12169411
Chromosome Location chr22:20786692-20786693
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20778600-20789400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr22:20779600-20789200 Weak transcription NHDF-Ad bronchial
3 chr22:20783400-20787200 Weak transcription HepG2 liver
4 chr22:20783400-20790000 Weak transcription HSMMtube muscle
5 chr22:20783600-20786800 Enhancers Lung lung
6 chr22:20783600-20789800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr22:20784200-20786800 Bivalent Enhancer Fetal Muscle Trunk muscle
8 chr22:20784200-20796200 Weak transcription Dnd41 blood
9 chr22:20784600-20786800 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
10 chr22:20785000-20787000 Bivalent Enhancer Fetal Brain Male brain
11 chr22:20785000-20789800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr22:20785200-20787000 Bivalent Enhancer Fetal Stomach stomach
13 chr22:20785200-20790200 Weak transcription Aorta Aorta
14 chr22:20785400-20786800 Bivalent Enhancer Fetal Muscle Leg muscle
15 chr22:20785400-20787200 Enhancers Ovary ovary
16 chr22:20785400-20788400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr22:20785600-20786800 Bivalent Enhancer H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr22:20785600-20788800 Weak transcription Osteobl bone
19 chr22:20785600-20789200 Weak transcription NHLF lung
20 chr22:20785800-20786800 Bivalent Enhancer Esophagus oesophagus
21 chr22:20785800-20786800 Strong transcription Right Atrium heart
22 chr22:20785800-20789800 Weak transcription Muscle Satellite Cultured Cells --
23 chr22:20785800-20789800 Weak transcription Brain Angular Gyrus brain
24 chr22:20785800-20790000 Weak transcription HSMM muscle
25 chr22:20785800-20790000 Weak transcription HUVEC blood vessel
26 chr22:20786000-20786800 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr22:20786000-20786800 Bivalent Enhancer Spleen Spleen
28 chr22:20786000-20787000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr22:20786000-20787000 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
30 chr22:20786000-20787600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr22:20786200-20787000 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
32 chr22:20786200-20788000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr22:20786200-20789600 Weak transcription Right Ventricle heart
34 chr22:20786200-20789800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
35 chr22:20786200-20789800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr22:20786200-20789800 Weak transcription Left Ventricle heart
37 chr22:20786200-20789800 Weak transcription NH-A brain
38 chr22:20786200-20790000 Weak transcription Fetal Heart heart
39 chr22:20786200-20790800 Weak transcription Gastric stomach
40 chr22:20786400-20786800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr22:20786400-20789400 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr22:20786400-20790800 Weak transcription Pancreas Pancrea
43 chr22:20786600-20787400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr22:20786600-20787400 Weak transcription Fetal Lung lung
45 chr22:20786600-20788200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr22:20786600-20789200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr22:20786600-20789400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr22:20786600-20789800 Weak transcription Colon Smooth Muscle Colon

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