Variant report

Variant	rs9620175
Chromosome Location	chr22:20861774-20861775
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:449)
CpG islands
(count:61)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:449 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	JUND	chr22:20861166-20862675	K562	blood:	n/a	chr22:20862262-20862273
2	GABPA	chr22:20861417-20862444	SK-N-SH	brain:	n/a	n/a
3	EP300	chr22:20861428-20862381	ECC-1	luminal epithelium:	n/a	chr22:20862299-20862309 chr22:20861849-20861856
4	NFIC	chr22:20861547-20862116	ECC-1	luminal epithelium:	n/a	n/a
5	PAX5	chr22:20861564-20862101	GM12892	blood:	n/a	n/a
6	MXI1	chr22:20861467-20862695	HepG2	liver:	n/a	n/a
7	CBX3	chr22:20860881-20862772	K562	blood:	n/a	n/a
8	SRF	chr22:20861632-20862415	K562	blood:	n/a	n/a
9	GABPA	chr22:20861582-20862202	HepG2	liver:	n/a	n/a
10	TBP	chr22:20861713-20862514	GM12878	blood:	n/a	n/a
11	ELF1	chr22:20861664-20862067	HepG2	liver:	n/a	chr22:20861849-20861858 chr22:20861848-20861859
12	TAF1	chr22:20861590-20862110	HepG2	liver:	n/a	n/a
13	POLR2A	chr22:20861610-20862200	PANC-1	pancreas:	n/a	n/a
14	SPI1	chr22:20861392-20862176	GM12878	blood:	n/a	n/a
15	REST	chr22:20861652-20862405	K562	blood:	n/a	n/a
16	POLR2A	chr22:20861499-20862517	K562	blood:	n/a	n/a
17	ZNF143	chr22:20861536-20862087	H1-hESC	embryonic stem cell:	n/a	chr22:20861823-20861841 chr22:20861794-20861812 chr22:20861798-20861817
18	IRF1	chr22:20861572-20862584	K562	blood:	n/a	chr22:20862404-20862418 chr22:20862402-20862416 chr22:20862404-20862415
19	SIX5	chr22:20861578-20861967	GM12878	blood:	n/a	chr22:20861821-20861835 chr22:20861792-20861806
20	GABPA	chr22:20861607-20862088	H1-hESC	embryonic stem cell:	n/a	n/a
21	POLR2A	chr22:20861589-20862036	A549	lung:	n/a	n/a
22	TAF1	chr22:20861577-20862087	PFSK-1	brain:	n/a	n/a
23	POLR2A	chr22:20861550-20862141	HEK293	kidney:	n/a	n/a
24	FOXP2	chr22:20861610-20862089	PFSK-1	brain:	n/a	n/a
25	GABPA	chr22:20861415-20862546	HL-60	blood:	n/a	n/a
26	SIX5	chr22:20861565-20862166	H1-hESC	embryonic stem cell:	n/a	chr22:20861821-20861835 chr22:20861792-20861806
27	PAX5	chr22:20861503-20861982	GM12891	blood:	n/a	n/a
28	RFX5	chr22:20860954-20862463	K562	blood:	n/a	n/a
29	TCF12	chr22:20861533-20862034	GM12878	blood:	n/a	chr22:20861604-20861612
30	TAF1	chr22:20861721-20862092	GM12891	blood:	n/a	n/a
31	IRF1	chr22:20861499-20862506	K562	blood:	n/a	chr22:20862404-20862418 chr22:20862402-20862416 chr22:20862404-20862415
32	GABPA	chr22:20861566-20862095	GM12878	blood:	n/a	n/a
33	HEY1	chr22:20861458-20862748	K562	blood:	n/a	n/a
34	ATF3	chr22:20861734-20862047	A549	lung:	n/a	n/a
35	MXI1	chr22:20861556-20862537	GM12878	blood:	n/a	n/a
36	USF1	chr22:20861655-20861912	A549	lung:	n/a	n/a
37	MAFK	chr22:20861689-20862075	HepG2	liver:	n/a	n/a
38	MAX	chr22:20861603-20862239	HepG2	liver:	n/a	n/a
39	CCNT2	chr22:20861596-20862432	K562	blood:	n/a	n/a
40	POLR2A	chr22:20861615-20862122	A549	lung:	n/a	n/a
41	GABPA	chr22:20861596-20862054	Hela-S3	cervix:	n/a	n/a
42	SIN3AK20	chr22:20861615-20861961	H1-hESC	embryonic stem cell:	n/a	n/a
43	POLR2A	chr22:20861501-20862599	MCF-7	breast:	n/a	n/a
44	SIN3A	chr22:20861534-20862670	H1-hESC	embryonic stem cell:	n/a	n/a
45	MAZ	chr22:20861645-20862588	HepG2	liver:	n/a	n/a
46	POLR2A	chr22:20861560-20862071	HepG2	liver:	n/a	n/a
47	POLR2A	chr22:20861630-20862600	HepG2	liver:	n/a	n/a
48	POLR2A	chr22:20861363-20862745	K562	blood:	n/a	n/a
49	POLR2A	chr22:20861553-20862583	K562	blood:	n/a	n/a
50	FOXM1	chr22:20861570-20862359	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr22:20861768-20861818	CMK	blood:	n/a
2	chr22:20861768-20861818	SK-N-SH	brain:	n/a
3	chr22:20861768-20861818	AG09309	skin:	n/a
4	chr22:20861768-20861818	HRCEpiC	kidney:	n/a
5	chr22:20861768-20861818	HMEC	breast:	n/a
6	chr22:20861768-20861818	T-47D	breast:	n/a
7	chr22:20861768-20861818	GM12892	blood:	n/a
8	chr22:20861768-20861818	PrEC	prostate:	n/a
9	chr22:20861768-20861818	Caco-2	colon:	n/a
10	chr22:20861768-20861818	AoSMC	blood vessel:	n/a
11	chr22:20861768-20861818	HCT-116	colon:	n/a
12	chr22:20861768-20861818	HepG2	liver:	n/a
13	chr22:20861768-20861818	HUVEC	blood vessel:	n/a
14	chr22:20861768-20861818	GM19239	blood:	n/a
15	chr22:20861768-20861818	IMR90	lung:	fetal
16	chr22:20861768-20861818	ovcar-3	ovarian:	n/a
17	chr22:20861768-20861818	HEK293	kidney:	embryo
18	chr22:20861768-20861818	HAEpiC	amniotic membrane:	n/a
19	chr22:20861768-20861818	HCPEpiC	choroid plexus:	n/a
20	chr22:20861768-20861818	SK-N-SH_RA	brain:	n/a
21	chr22:20861768-20861818	HPAEpiC	pulmonary alveolar:	n/a
22	chr22:20861768-20861818	AG04450	lung:	fetal
23	chr22:20861768-20861818	SKMC	muscle:	n/a
24	chr22:20861768-20861818	GM12891	blood:	n/a
25	chr22:20861768-20861818	ProgFib	skin:	n/a
26	chr22:20861768-20861818	NB4	blood:	n/a
27	chr22:20861768-20861818	HRPEpiC	eye:	n/a
28	chr22:20861768-20861818	H1-hESC	embryonic stem cell:	embryo
29	chr22:20861768-20861818	GM06990	blood:	n/a
30	chr22:20861768-20861818	MCF-7	breast:	n/a
31	chr22:20861768-20861818	HNPCEpiC	eye:	n/a
32	chr22:20861768-20861818	AG10803	skin:	n/a
33	chr22:20861768-20861818	Hepatocyte	liver:	n/a
34	chr22:20861768-20861818	HIPEpiC	eye:	n/a
35	chr22:20861768-20861818	BJ	skin:	n/a
36	chr22:20861768-20861818	AG09319	gingival:	n/a
37	chr22:20861768-20861818	HEEpiC	esophagus:	n/a
38	chr22:20861768-20861818	NT2-D1	testis:	n/a
39	chr22:20861768-20861818	RPTEC	kidney:	n/a
40	chr22:20861768-20861818	HRE	kidney:	n/a
41	chr22:20861768-20861818	HCF	heart:	n/a
42	chr22:20861768-20861818	K562	blood:	n/a
43	chr22:20861768-20861818	U87	brain:	n/a
44	chr22:20861768-20861818	SK-N-MC	brain:	n/a
45	chr22:20861768-20861818	PFSK-1	brain:	n/a
46	chr22:20861768-20861818	HCM	heart:	n/a
47	chr22:20861768-20861818	AG04449	skin:	fetal
48	chr22:20861768-20861818	HL-60	blood:	n/a
49	chr22:20861768-20861818	Hela-S3	cervix:	n/a
50	chr22:20861768-20861818	SAEC	small airway:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr22:20008358..20010094-chr22:20860375..20863352,2	K562	blood:
2	chr22:20848222..20853586-chr22:20860582..20863781,12	MCF-7	breast:
3	chr22:20848840..20851795-chr22:20859607..20863336,5	MCF-7	breast:
4	chr22:20745887..20749598-chr22:20860814..20863598,4	K562	blood:
5	chr22:20860252..20863583-chr22:20903242..20905913,3	K562	blood:
6	chr22:20783145..20785116-chr22:20860799..20864007,3	K562	blood:
7	chr22:20804137..20806874-chr22:20861099..20863028,2	K562	blood:
8	chr22:20783145..20785563-chr22:20860799..20863807,3	K562	blood:
9	chr22:20745935..20751039-chr22:20860625..20865044,6	K562	blood:
10	chr12:53342692..53344306-chr22:20859968..20861837,2	MCF-7	breast:

No data

Variant related genes	Relation type
MED15	TF binding region
MED15	CpG island
ENSG00000185252	Chromatin interaction
ENSG00000170421	Chromatin interaction
ENSG00000111057	Chromatin interaction
ENSG00000215493	Chromatin interaction
ENSG00000244486	Chromatin interaction
ENSG00000099917	Chromatin interaction
ENSG00000183597	Chromatin interaction
ENSG00000099910	Chromatin interaction

Extended variants
information (count: 69 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12166733	0.81[AFR][1000 genomes]
rs12169411	1.00[AMR][1000 genomes]
rs527927	1.00[AMR][1000 genomes]
rs56334023	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57130282	0.81[AFR][1000 genomes]
rs73879373	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73879386	1.00[AMR][1000 genomes]
rs73879387	1.00[AMR][1000 genomes]
rs73879388	1.00[AMR][1000 genomes]
rs73879391	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73879394	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73879397	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73879398	0.81[AFR][1000 genomes]
rs73881003	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9623740	1.00[AMR][1000 genomes]
rs9623800	1.00[AMR][1000 genomes]
rs9623980	0.84[AFR][1000 genomes]
rs9624088	0.81[AFR][1000 genomes]
rs9624089	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9624141	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:49 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518950	chr22:20306993-20965555	Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	68 gene(s)	inside rSNPs	diseases
2	nsv432174	chr22:20309346-21102446	Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	77 gene(s)	inside rSNPs	diseases
3	nsv1056614	chr22:20470598-21462724	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
4	nsv828954	chr22:20641693-20904711	Enhancers Genic enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
5	nsv491637	chr22:20659547-21440514	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
6	nsv916634	chr22:20659547-21464119	Strong transcription Flanking Active TSS Genic enhancers Weak transcription Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
7	nsv533942	chr22:20659547-21505417	Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
8	nsv529472	chr22:20659547-21561514	Flanking Active TSS Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
9	nsv914390	chr22:20697466-21460008	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
10	nsv588291	chr22:20698139-21461274	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
11	nsv917647	chr22:20708889-21440515	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
12	nsv531742	chr22:20708890-21407690	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
13	nsv533852	chr22:20708890-21561514	Weak transcription Genic enhancers Strong transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
14	nsv1061867	chr22:20716924-21462446	Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
15	nsv1058870	chr22:20716924-21567219	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	104 gene(s)	inside rSNPs	diseases
16	nsv918225	chr22:20716924-21611338	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	105 gene(s)	inside rSNPs	diseases
17	nsv914393	chr22:20718116-21034788	Genic enhancers Strong transcription Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
18	nsv531744	chr22:20718170-21427936	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
19	nsv915954	chr22:20732437-21505417	Weak transcription Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
20	nsv588293	chr22:20732809-21004476	Bivalent/Poised TSS Strong transcription Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
21	nsv948669	chr22:20732809-21461607	Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
22	nsv531746	chr22:20733427-21505417	Strong transcription Flanking Active TSS Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
23	nsv588294	chr22:20733495-21365384	Bivalent Enhancer Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	92 gene(s)	inside rSNPs	diseases
24	nsv588295	chr22:20733495-21462353	Flanking Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
25	nsv588296	chr22:20733495-21465780	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
26	nsv1056065	chr22:20734244-21460658	Weak transcription Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
27	nsv544586	chr22:20734244-21460658	Strong transcription Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
28	nsv834136	chr22:20738730-20891767	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	34 gene(s)	inside rSNPs	diseases
29	nsv1067074	chr22:20739124-21440654	Flanking Active TSS Weak transcription Active TSS Genic enhancers Strong transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
30	nsv544587	chr22:20739124-21440654	Weak transcription Strong transcription Bivalent Enhancer Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
31	nsv1066482	chr22:20739125-21440655	Enhancers Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
32	nsv544588	chr22:20739125-21440655	Strong transcription Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
33	nsv1065725	chr22:20739324-20927615	Bivalent/Poised TSS Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
34	nsv544589	chr22:20739324-20927615	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
35	nsv1063333	chr22:20739324-21353297	Enhancers Weak transcription Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
36	nsv544590	chr22:20739324-21353297	Genic enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	78 gene(s)	inside rSNPs	diseases
37	nsv1059978	chr22:20739324-21440515	Genic enhancers Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
38	nsv544591	chr22:20739324-21440515	Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
39	nsv949306	chr22:20742450-21461607	Weak transcription Enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
40	nsv523162	chr22:20743536-21462353	Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
41	nsv1056565	chr22:20745762-21460658	Bivalent/Poised TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
42	nsv529335	chr22:20748976-21499971	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	101 gene(s)	inside rSNPs	diseases
43	nsv533337	chr22:20754407-21440515	Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
44	nsv918090	chr22:20754421-21505417	Flanking Active TSS Enhancers Genic enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
45	nsv491620	chr22:20754422-21440514	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
46	nsv1067639	chr22:20754422-21505417	Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
47	nsv529720	chr22:20754422-21505417	Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	99 gene(s)	inside rSNPs	diseases
48	nsv834138	chr22:20759359-20951242	Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
49	nsv1058923	chr22:20855359-21000991	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:20859000-20861800	Weak transcription	Small Intestine	intestine
2	chr22:20860800-20861800	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
3	chr22:20860800-20861800	Flanking Active TSS	Dnd41	blood
4	chr22:20861000-20861800	Active TSS	Brain Germinal Matrix	brain
5	chr22:20861000-20861800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
6	chr22:20861000-20863200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr22:20861200-20861800	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr22:20861200-20861800	Enhancers	Spleen	Spleen
9	chr22:20861200-20861800	Flanking Active TSS	Osteobl	bone
10	chr22:20861200-20863200	Active TSS	ES-I3 Cell Line	embryonic stem cell
11	chr22:20861200-20863200	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr22:20861200-20863200	Active TSS	HUES64 Cell Line	embryonic stem cell
13	chr22:20861200-20863200	Active TSS	iPS-15b Cell Line	embryonic stem cell
14	chr22:20861400-20861800	Flanking Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr22:20861400-20861800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr22:20861400-20861800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr22:20861400-20861800	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
18	chr22:20861400-20861800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
19	chr22:20861400-20861800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
20	chr22:20861400-20861800	Flanking Active TSS	Primary hematopoietic stem cells	blood
21	chr22:20861400-20861800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
22	chr22:20861400-20861800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
23	chr22:20861400-20861800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
24	chr22:20861400-20861800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
25	chr22:20861400-20861800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
26	chr22:20861400-20861800	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
27	chr22:20861400-20861800	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
28	chr22:20861400-20861800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
29	chr22:20861400-20861800	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
30	chr22:20861400-20861800	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
31	chr22:20861400-20861800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr22:20861400-20861800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr22:20861400-20861800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr22:20861400-20861800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr22:20861400-20861800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr22:20861400-20861800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
37	chr22:20861400-20861800	Flanking Active TSS	Adipose Nuclei	Adipose
38	chr22:20861400-20861800	Flanking Active TSS	Liver	Liver
39	chr22:20861400-20861800	Flanking Active TSS	Duodenum Mucosa	Duodenum
40	chr22:20861400-20861800	Flanking Active TSS	Fetal Muscle Trunk	muscle
41	chr22:20861400-20861800	Flanking Active TSS	Fetal Thymus	thymus
42	chr22:20861400-20861800	Flanking Active TSS	Pancreas	Pancrea
43	chr22:20861400-20861800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
44	chr22:20861400-20861800	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
45	chr22:20861400-20861800	Flanking Active TSS	Right Ventricle	heart
46	chr22:20861400-20861800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
47	chr22:20861400-20861800	Flanking Active TSS	GM12878-XiMat	blood
48	chr22:20861400-20861800	Flanking Active TSS	HMEC	breast
49	chr22:20861400-20861800	Flanking Active TSS	HSMM	muscle
50	chr22:20861400-20861800	Flanking Active TSS	HUVEC	blood vessel

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