The 2.0 version of rSNPBase

Variant report

Variant rs1217444
Chromosome Location chr1:114458958-114458959
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114448600-114461400 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr1:114449200-114461800 Weak transcription Fetal Brain Male brain
3 chr1:114449800-114470400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:114454200-114459000 Weak transcription Esophagus oesophagus
5 chr1:114454600-114461000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr1:114455000-114459800 Weak transcription HMEC breast
7 chr1:114455000-114460000 Weak transcription NHEK skin
8 chr1:114455200-114459400 Weak transcription Placenta Placenta
9 chr1:114455400-114459000 Weak transcription Primary B cells from cord blood blood
10 chr1:114455400-114460200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:114455600-114459000 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:114455600-114461800 Weak transcription NH-A brain
13 chr1:114455800-114459600 Weak transcription Brain Germinal Matrix brain
14 chr1:114455800-114465400 Weak transcription Primary monocytes fromperipheralblood blood
15 chr1:114456000-114459200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:114456000-114459400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:114456000-114460400 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr1:114456000-114460600 Weak transcription Aorta Aorta
19 chr1:114456000-114460600 Weak transcription Fetal Lung lung
20 chr1:114456000-114462200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr1:114456000-114462800 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:114456000-114463600 Weak transcription Duodenum Mucosa Duodenum
23 chr1:114456200-114459200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr1:114456200-114459200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr1:114456200-114459200 Weak transcription Osteobl bone
26 chr1:114456200-114460000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:114456200-114460200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr1:114456200-114460600 Weak transcription Fetal Intestine Small intestine
29 chr1:114456200-114460600 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr1:114456200-114460800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:114456200-114460800 Weak transcription Dnd41 blood
32 chr1:114456200-114461200 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr1:114456200-114461200 Weak transcription Stomach Smooth Muscle stomach
34 chr1:114456200-114465400 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr1:114456200-114470400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:114456200-114470600 Weak transcription Brain Substantia Nigra brain
37 chr1:114456200-114471200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr1:114456400-114459200 Weak transcription Hela-S3 cervix
39 chr1:114456400-114460200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:114456400-114460200 Weak transcription NHLF lung
41 chr1:114456400-114460800 Weak transcription HSMMtube muscle
42 chr1:114456400-114470400 Weak transcription HSMM muscle
43 chr1:114456600-114459600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:114457200-114459400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr1:114457200-114459800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:114457200-114470600 Weak transcription Primary T cells from cord blood blood
47 chr1:114457600-114460800 Weak transcription Thymus Thymus
48 chr1:114457600-114461600 Weak transcription Fetal Stomach stomach
49 chr1:114457600-114470400 Weak transcription Fetal Thymus thymus
50 chr1:114457800-114461600 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015