Variant report

Variant	rs12186681
Chromosome Location	chr5:90940109-90940110
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10071476	0.81[EUR][1000 genomes]
rs1566996	0.81[EUR][1000 genomes]
rs2914021	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2914023	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2914025	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2935250	0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2939242	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2939246	0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2939259	0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2939260	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2939261	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7726364	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:90934200-90940400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr5:90936200-90941000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr5:90936600-90942800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr5:90938000-90940400	Enhancers	Fetal Brain Female	brain
5	chr5:90938400-90941000	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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