Variant report

Variant	rs12191886
Chromosome Location	chr6:143555358-143555359
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:143553609..143555548-chr6:143748071..143748996,10	MCF-7	breast:
2	chr6:143554978..143557095-chr6:143585406..143587197,2	K562	blood:
3	chr6:143553948..143556735-chr6:143570226..143572984,2	K562	blood:
4	chr6:143375950..143378205-chr6:143555143..143557355,2	K562	blood:

rs_ID	r²[population]
rs11155283	0.94[CEU][hapmap];0.81[AMR][1000 genomes]
rs2043490	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4896627	0.89[CEU][hapmap]
rs6910775	0.89[CEU][hapmap];0.84[MEX][hapmap];0.83[AMR][1000 genomes]

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143527400-143578800	Weak transcription	Brain Hippocampus Middle	brain
2	chr6:143535000-143568000	Weak transcription	Aorta	Aorta
3	chr6:143545400-143557400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:143545400-143588800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr6:143545600-143557200	Weak transcription	Left Ventricle	heart
6	chr6:143545600-143564000	Weak transcription	Right Atrium	heart
7	chr6:143546000-143576200	Weak transcription	HepG2	liver
8	chr6:143546200-143571200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr6:143547000-143557400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr6:143547800-143558600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr6:143548000-143559400	Weak transcription	NHEK	skin
12	chr6:143550200-143570400	Weak transcription	Fetal Intestine Large	intestine
13	chr6:143550800-143559400	Weak transcription	K562	blood
14	chr6:143554000-143555600	Enhancers	Fetal Brain Male	brain
15	chr6:143554200-143555400	Enhancers	Ovary	ovary
16	chr6:143554200-143581400	Weak transcription	Psoas Muscle	Psoas
17	chr6:143554400-143556600	Weak transcription	Fetal Intestine Small	intestine
18	chr6:143554600-143555400	Enhancers	Cortex derived primary cultured neurospheres	brain
19	chr6:143554800-143556200	Enhancers	HUES48 Cell Line	embryonic stem cell
20	chr6:143554800-143556200	Enhancers	HMEC	breast
21	chr6:143554800-143556400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr6:143554800-143558000	Enhancers	iPS-15b Cell Line	embryonic stem cell
23	chr6:143555000-143555400	Enhancers	HUES64 Cell Line	embryonic stem cell
24	chr6:143555000-143555400	Enhancers	Fetal Heart	heart
25	chr6:143555000-143559400	Weak transcription	Stomach Smooth Muscle	stomach
26	chr6:143555000-143559600	Weak transcription	Liver	Liver
27	chr6:143555200-143556000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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