The 2.0 version of rSNPBase

Variant report

Variant rs1219395
Chromosome Location chr11:121762396-121762397
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:121750600-121763800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:121756200-121764000 Enhancers Primary monocytes fromperipheralblood blood
3 chr11:121757400-121762800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr11:121758400-121762600 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr11:121758600-121762400 Weak transcription Fetal Lung lung
6 chr11:121758600-121762800 Weak transcription Psoas Muscle Psoas
7 chr11:121760000-121764200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr11:121760000-121764800 Enhancers HSMMtube muscle
9 chr11:121760000-121767400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
10 chr11:121760000-121767400 Enhancers HMEC breast
11 chr11:121760000-121767400 Enhancers NHDF-Ad bronchial
12 chr11:121760000-121767600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr11:121760000-121767600 Enhancers NHEK skin
14 chr11:121760200-121767000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr11:121760200-121767000 Enhancers Osteobl bone
16 chr11:121760200-121767600 Enhancers HSMM muscle
17 chr11:121760400-121764000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr11:121760400-121764400 Enhancers NH-A brain
19 chr11:121760600-121762600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
20 chr11:121760600-121763200 Enhancers Aorta Aorta
21 chr11:121760600-121763600 Enhancers Brain Anterior Caudate brain
22 chr11:121760600-121763800 Weak transcription Placenta Amnion Placenta Amnion
23 chr11:121760600-121765800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr11:121760600-121767600 Enhancers Muscle Satellite Cultured Cells --
25 chr11:121761000-121762600 Enhancers Ovary ovary
26 chr11:121761000-121763600 Enhancers Adipose Nuclei Adipose
27 chr11:121761000-121763600 Enhancers Skeletal Muscle Male skeletal muscle
28 chr11:121761000-121764000 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr11:121761000-121764000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
30 chr11:121761000-121764000 Enhancers Fetal Muscle Leg muscle
31 chr11:121761200-121763200 Enhancers Brain Inferior Temporal Lobe brain
32 chr11:121761400-121762400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr11:121761400-121762800 Weak transcription Fetal Muscle Trunk muscle
34 chr11:121761400-121762800 Weak transcription Left Ventricle heart
35 chr11:121761400-121762800 Weak transcription Right Atrium heart
36 chr11:121761400-121763000 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr11:121761600-121762400 Enhancers Fetal Brain Female brain
38 chr11:121761600-121762800 Weak transcription NHLF lung
39 chr11:121761800-121762800 Weak transcription Brain Hippocampus Middle brain
40 chr11:121761800-121762800 Weak transcription Brain Substantia Nigra brain
41 chr11:121762000-121763200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
42 chr11:121762000-121767400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr11:121762200-121762400 Enhancers ES-WA7 Cell Line embryonic stem cell
44 chr11:121762200-121762400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
45 chr11:121762200-121763800 Enhancers HUES48 Cell Line embryonic stem cell
46 chr11:121762200-121767400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015