Variant report

Variant	rs1219399
Chromosome Location	chr11:121754634-121754635
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11218435	0.86[AFR][1000 genomes]
rs11218440	0.86[AFR][1000 genomes]
rs1219393	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1219395	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28378150	0.86[AFR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121748400-121760600	Weak transcription	Aorta	Aorta
2	chr11:121750600-121763800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:121752800-121760400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr11:121753000-121756600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr11:121753000-121756800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr11:121753000-121757000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr11:121753000-121757000	Weak transcription	NHDF-Ad	bronchial
8	chr11:121753000-121760200	Weak transcription	HSMM	muscle
9	chr11:121753000-121760200	Weak transcription	Osteobl	bone
10	chr11:121753200-121760600	Weak transcription	Muscle Satellite Cultured Cells	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links