Variant report

Variant rs12197348
Chromosome Location chr6:118949083-118949084
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118912200-118966200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr6:118920800-118951200 Weak transcription HSMM muscle
3 chr6:118927000-118965000 Weak transcription NHLF lung
4 chr6:118928000-118952000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr6:118928800-118951800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr6:118928800-118951800 Weak transcription Spleen Spleen
7 chr6:118931600-118970400 Weak transcription NH-A brain
8 chr6:118935600-118951400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr6:118940200-118966400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr6:118940400-118950200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr6:118940400-118951800 Weak transcription HMEC breast
12 chr6:118940400-118960600 Weak transcription Colon Smooth Muscle Colon
13 chr6:118940600-118951400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr6:118940600-118955200 Weak transcription Brain Substantia Nigra brain
15 chr6:118940800-118951400 Weak transcription Left Ventricle heart
16 chr6:118940800-118953400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:118940800-118954800 Weak transcription Lung lung
18 chr6:118940800-118955000 Weak transcription Brain Hippocampus Middle brain
19 chr6:118940800-118960200 Weak transcription Brain Inferior Temporal Lobe brain
20 chr6:118942200-118951400 Weak transcription Liver Liver
21 chr6:118942600-118957600 Weak transcription Pancreas Pancrea
22 chr6:118943800-118951400 Weak transcription Right Atrium heart
23 chr6:118943800-118954800 Weak transcription Muscle Satellite Cultured Cells --
24 chr6:118943800-118970000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr6:118944000-118951000 Weak transcription Small Intestine intestine
26 chr6:118944200-118949200 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr6:118944400-118951400 Weak transcription Osteobl bone
28 chr6:118944400-118951800 Weak transcription Gastric stomach
29 chr6:118944400-118961600 Weak transcription Ovary ovary
30 chr6:118945000-118949400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
31 chr6:118945000-118949600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr6:118945800-118955800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr6:118946200-118955000 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr6:118947200-118950200 ZNF genes & repeats Dnd41 blood
35 chr6:118947200-118953800 Strong transcription Primary B cells from cord blood blood
36 chr6:118947400-118950800 Weak transcription K562 blood
37 chr6:118947400-118951200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr6:118947400-118951400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr6:118947600-118953800 Strong transcription Primary T cells from cord blood blood
40 chr6:118947800-118950800 Weak transcription HUES48 Cell Line embryonic stem cell
41 chr6:118948000-118949400 Strong transcription Thymus Thymus
42 chr6:118948000-118951000 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr6:118948000-118951000 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr6:118948000-118951000 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr6:118948000-118951000 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr6:118948000-118951000 Weak transcription Fetal Muscle Trunk muscle
47 chr6:118948000-118951000 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr6:118948000-118951200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr6:118948000-118951200 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr6:118948000-118951400 Weak transcription H1 Cell Line embryonic stem cell

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