Variant report

Variant	rs9489485
Chromosome Location	chr6:118971868-118971869
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:118971590-118973146	K562	blood:	n/a	n/a
2	MAX	chr6:118971665-118973332	H1-hESC	embryonic stem cell:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
3	SIN3AK20	chr6:118971614-118971911	H1-hESC	embryonic stem cell:	n/a	n/a
4	CTCF	chr6:118971860-118972010	SAEC	small airway:	n/a	n/a
5	CEBPB	chr6:118971240-118971891	IMR90	lung:	n/a	chr6:118971688-118971699
6	POLR2A	chr6:118971546-118973280	GM19099	blood:	n/a	n/a
7	POLR2A	chr6:118971637-118971890	HUVEC	blood vessel:	n/a	n/a
8	POLR2A	chr6:118971844-118973096	MCF10A-Er-Src	breast:	n/a	n/a
9	POLR2A	chr6:118971567-118973212	ProgFib	skin:	n/a	n/a
10	MXI1	chr6:118970121-118973661	SK-N-SH	brain:	n/a	chr6:118973072-118973081
11	MAX	chr6:118971796-118973334	HepG2	liver:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
12	POLR2A	chr6:118971544-118973210	H1-neurons	neurons:	n/a	n/a
13	MAX	chr6:118971686-118973351	GM12878	blood:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
14	MYC	chr6:118971600-118973237	K562	blood:	n/a	chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
15	POLR2A	chr6:118971483-118973331	IMR90	lung:	n/a	n/a
16	REST	chr6:118971563-118973518	H1-neurons	neurons:	n/a	chr6:118972340-118972349 chr6:118972199-118972209 chr6:118972336-118972346 chr6:118972197-118972211
17	PML	chr6:118971382-118973332	GM12878	blood:	n/a	n/a
18	E2F6	chr6:118971779-118973168	K562	blood:	n/a	chr6:118972619-118972629 chr6:118971912-118971927 chr6:118971976-118971988 chr6:118972965-118972977 chr6:118972800-118972809 chr6:118971949-118971959 chr6:118972930-118972942 chr6:118972272-118972283 chr6:118971837-118971854
19	POLR2A	chr6:118971710-118972003	A549	lung:	n/a	n/a
20	CREB1	chr6:118971570-118973287	HepG2	liver:	n/a	n/a
21	CTCF	chr6:118971860-118972010	HMEC	breast:	n/a	n/a
22	RCOR1	chr6:118971443-118973311	K562	blood:	n/a	n/a
23	MAZ	chr6:118971414-118973387	IMR90	lung:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
24	EBF1	chr6:118971594-118971891	GM12878	blood:	n/a	chr6:118971786-118971795 chr6:118971784-118971797 chr6:118971785-118971795
25	CEBPB	chr6:118971529-118971882	HepG2	liver:	n/a	chr6:118971688-118971699
26	TCF7L2	chr6:118971616-118973273	HCT-116	colon:	n/a	n/a
27	YY1	chr6:118971589-118972839	GM12892	blood:	n/a	chr6:118972800-118972809 chr6:118972232-118972241 chr6:118971948-118971962 chr6:118972304-118972318 chr6:118971858-118971869 chr6:118972797-118972811 chr6:118972759-118972768 chr6:118971948-118971957 chr6:118971743-118971754 chr6:118972275-118972286 chr6:118971943-118971957
28	ZNF143	chr6:118971734-118973070	GM12878	blood:	n/a	chr6:118972781-118972791 chr6:118972109-118972119 chr6:118972655-118972665 chr6:118972761-118972771
29	FOXP2	chr6:118971638-118972044	PFSK-1	brain:	n/a	n/a
30	POLR2A	chr6:118971462-118973687	K562	blood:	n/a	n/a
31	POLR2A	chr6:118971624-118973162	GM12878	blood:	n/a	n/a
32	POLR2A	chr6:118971536-118973240	GM12892	blood:	n/a	n/a
33	BHLHE40	chr6:118971677-118973245	GM12878	blood:	n/a	chr6:118971942-118971958
34	CTCF	chr6:118971861-118971879	MCF-7	breast:	n/a	n/a
35	SIN3AK20	chr6:118971593-118973264	PANC-1	pancreas:	n/a	n/a
36	MTA3	chr6:118971438-118971939	GM12878	blood:	n/a	n/a
37	MAX	chr6:118971660-118973420	K562	blood:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
38	TAF1	chr6:118971511-118972255	H1-hESC	embryonic stem cell:	n/a	n/a
39	MAZ	chr6:118971599-118973366	GM12878	blood:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
40	MAX	chr6:118971503-118973150	NB4	blood:	n/a	chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
41	MAZ	chr6:118971509-118973269	K562	blood:	n/a	chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
42	SMARCB1	chr6:118971555-118973223	Hela-S3	cervix:	n/a	n/a
43	SIN3AK20	chr6:118971647-118972394	SK-N-SH	brain:	n/a	n/a
44	CHD1	chr6:118971680-118972707	GM12878	blood:	n/a	chr6:118972583-118972593
45	POLR2A	chr6:118971653-118971937	H1-hESC	embryonic stem cell:	n/a	n/a
46	MAX	chr6:118971784-118973357	MCF-7	breast:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808
47	POLR2A	chr6:118971607-118973368	GM12892	blood:	n/a	n/a
48	RAD21	chr6:118971373-118972053	IMR90	lung:	n/a	n/a
49	ZBTB7A	chr6:118971537-118972742	ECC-1	luminal epithelium:	n/a	chr6:118972108-118972117
50	MAX	chr6:118971848-118973296	SK-N-SH	brain:	n/a	chr6:118973262-118973271 chr6:118972272-118972282 chr6:118973072-118973083 chr6:118972798-118972808

No.	Distal block	Cell Line	Cell type
1	chr6:118966044..118969834-chr6:118971302..118974528,3	MCF-7	breast:
2	chr6:118957671..118960010-chr6:118969497..118972042,2	MCF-7	breast:
3	chr6:118970545..118972377-chr6:119033430..119035366,2	K562	blood:
4	chr6:118951505..118954170-chr6:118971073..118972988,2	K562	blood:
5	chr6:118965633..118969017-chr6:118971135..118973717,5	K562	blood:
6	chr6:118962546..118964256-chr6:118970270..118972608,2	MCF-7	breast:
7	chr6:118969568..118974185-chr6:119029207..119033276,8	K562	blood:

Variant related genes	Relation type
CEP85L	TF binding region
ENSG00000111860	Chromatin interaction

Extended variants
information (count: 108 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:89)

rs_ID	r²[population]
rs10080340	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10155773	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10214801	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10457339	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10457340	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10457346	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs11153749	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11153762	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12190964	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12191005	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12191529	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12191962	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12192532	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12197348	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12199189	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12199190	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12200660	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12201928	1.00[EUR][1000 genomes]
rs12202466	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12202932	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12204374	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12205793	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12206369	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12206459	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12207554	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12209500	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12209566	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs12211934	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12212089	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12213494	1.00[EUR][1000 genomes]
rs12215364	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12215456	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12215565	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12215706	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13328242	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13437148	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13437314	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs60500545	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6903291	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6903632	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6904070	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6904344	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6934770	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs6939873	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7743702	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7755203	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7759420	1.00[AMR][1000 genomes]
rs7764014	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9320657	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9320659	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9320661	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9320662	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9372510	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9387582	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9398488	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9481810	0.83[AFR][1000 genomes]
rs9481812	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9481818	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9481822	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9481823	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9481824	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9481829	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9481830	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9481835	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9481839	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489398	0.96[AFR][1000 genomes]
rs9489402	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9489408	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9489410	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9489415	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9489422	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs9489427	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489430	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489434	1.00[AFR][1000 genomes]
rs9489435	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489451	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489464	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489468	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489472	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489480	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489481	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9489484	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9489488	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9489490	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9489492	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9489495	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9489496	0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9489501	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs9489505	0.83[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532051	chr6:118551027-119044197	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv1020463	chr6:118593028-119146363	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
3	nsv1025403	chr6:118635123-119122551	Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
4	nsv1025456	chr6:118669672-119058789	Active TSS Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
5	nsv1027444	chr6:118687556-119121660	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
6	nsv538428	chr6:118687556-119121660	Flanking Active TSS Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
7	nsv949321	chr6:118692304-119137658	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
8	nsv432958	chr6:118692307-119010307	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
9	nsv1034448	chr6:118698169-119016383	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
10	nsv1025097	chr6:118699752-119058789	Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
11	nsv532052	chr6:118711850-119057295	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
12	nsv432959	chr6:118716318-119010307	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
13	nsv604556	chr6:118722589-119065365	Active TSS Strong transcription Enhancers Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
14	nsv949416	chr6:118772508-119033063	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
15	nsv948980	chr6:118772508-119137658	Genic enhancers Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
16	nsv604559	chr6:118786486-119113317	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
17	nsv1022865	chr6:118786586-119058789	ZNF genes & repeats Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
18	nsv1020405	chr6:118786586-119241006	ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
19	nsv1030331	chr6:118874345-118975680	Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:118970000-118973000	Active TSS	GM12878-XiMat	blood
2	chr6:118970000-118973200	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:118970000-118973200	Active TSS	Fetal Brain Male	brain
4	chr6:118970200-118973000	Active TSS	Cortex derived primary cultured neurospheres	brain
5	chr6:118970200-118973000	Active TSS	HMEC	breast
6	chr6:118970200-118973200	Active TSS	NHLF	lung
7	chr6:118970400-118972000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:118970400-118973000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr6:118970400-118973000	Active TSS	Brain Inferior Temporal Lobe	brain
10	chr6:118970400-118973000	Active TSS	Fetal Muscle Leg	muscle
11	chr6:118970400-118973400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr6:118970400-118973400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr6:118970400-118973400	Active TSS	Duodenum Smooth Muscle	Duodenum
14	chr6:118970600-118972200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
15	chr6:118970600-118973000	Active TSS	Stomach Smooth Muscle	stomach
16	chr6:118970600-118973200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr6:118970600-118973200	Active TSS	Psoas Muscle	Psoas
18	chr6:118970600-118973400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:118970600-118973400	Active TSS	Ovary	ovary
20	chr6:118970600-118973400	Active TSS	Right Atrium	heart
21	chr6:118970600-118973400	Active TSS	HSMM	muscle
22	chr6:118970600-118973600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
23	chr6:118970600-118973600	Active TSS	A549	lung
24	chr6:118970600-118973600	Active TSS	NHDF-Ad	bronchial
25	chr6:118970800-118973000	Active TSS	Skeletal Muscle Female	skeletal muscle
26	chr6:118970800-118973200	Active TSS	Fetal Adrenal Gland	Adrenal Gland
27	chr6:118970800-118973200	Active TSS	Fetal Stomach	stomach
28	chr6:118970800-118973200	Active TSS	Skeletal Muscle Male	skeletal muscle
29	chr6:118970800-118973400	Active TSS	HUES6 Cell Line	embryonic stem cell
30	chr6:118970800-118973400	Active TSS	HSMMtube	muscle
31	chr6:118970800-118973600	Active TSS	Muscle Satellite Cultured Cells	--
32	chr6:118970800-118973800	Active TSS	iPS-15b Cell Line	embryonic stem cell
33	chr6:118970800-118974000	Active TSS	ES-I3 Cell Line	embryonic stem cell
34	chr6:118971000-118972400	Flanking Active TSS	Primary hematopoietic stem cells	blood
35	chr6:118971000-118973200	Active TSS	H1 Cell Line	embryonic stem cell
36	chr6:118971000-118973200	Active TSS	Fetal Brain Female	brain
37	chr6:118971000-118973400	Flanking Active TSS	Primary B cells from cord blood	blood
38	chr6:118971000-118973600	Active TSS	Brain Angular Gyrus	brain
39	chr6:118971200-118972800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
40	chr6:118971200-118973000	Active TSS	Fetal Muscle Trunk	muscle
41	chr6:118971200-118973000	Active TSS	Fetal Thymus	thymus
42	chr6:118971200-118973200	Active TSS	Breast Myoepithelial Primary Cells	Breast
43	chr6:118971200-118973200	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
44	chr6:118971200-118973200	Active TSS	Sigmoid Colon	Sigmoid Colon
45	chr6:118971200-118973200	Active TSS	Osteobl	bone
46	chr6:118971200-118973400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
47	chr6:118971200-118973400	Active TSS	H9 Cell Line	embryonic stem cell
48	chr6:118971200-118973400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr6:118971200-118973400	Active TSS	Right Ventricle	heart
50	chr6:118971200-118973600	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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