The 2.0 version of rSNPBase

Variant report

Variant rs12202063
Chromosome Location chr6:37273035-37273036
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37242000-37281400 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr6:37251000-37283800 Weak transcription Hela-S3 cervix
3 chr6:37252800-37277000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:37253000-37275600 Weak transcription A549 lung
5 chr6:37253000-37277000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:37253000-37280400 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr6:37253000-37284600 Weak transcription Stomach Mucosa stomach
8 chr6:37254000-37273600 Weak transcription HMEC breast
9 chr6:37255600-37279600 Weak transcription NHDF-Ad bronchial
10 chr6:37259800-37275600 Weak transcription Fetal Brain Male brain
11 chr6:37260000-37276000 Weak transcription Brain Cingulate Gyrus brain
12 chr6:37260200-37273600 Weak transcription Esophagus oesophagus
13 chr6:37260200-37274000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr6:37260600-37275400 Weak transcription Rectal Smooth Muscle rectum
15 chr6:37260800-37275600 Weak transcription Brain Angular Gyrus brain
16 chr6:37261600-37286000 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr6:37261800-37280800 Weak transcription iPS-18 Cell Line embryonic stem cell
18 chr6:37262400-37273400 Weak transcription H1 Cell Line embryonic stem cell
19 chr6:37262400-37273800 Weak transcription H9 Cell Line embryonic stem cell
20 chr6:37262400-37275600 Weak transcription Brain Anterior Caudate brain
21 chr6:37262400-37277000 Weak transcription Psoas Muscle Psoas
22 chr6:37262600-37275400 Weak transcription Fetal Brain Female brain
23 chr6:37263200-37280600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:37264800-37277600 Strong transcription Primary T cells from cord blood blood
25 chr6:37265600-37283200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr6:37267200-37274600 Strong transcription Primary T cells fromperipheralblood blood
27 chr6:37268200-37275000 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr6:37268400-37273200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr6:37268400-37274600 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr6:37268400-37277400 Strong transcription Primary neutrophils fromperipheralblood blood
31 chr6:37268400-37277600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr6:37268600-37274200 Strong transcription Duodenum Smooth Muscle Duodenum
33 chr6:37268600-37274400 Strong transcription Primary T helper naive cells fromperipheralblood blood
34 chr6:37268600-37274400 Strong transcription Osteobl bone
35 chr6:37268600-37274600 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr6:37269000-37274600 Strong transcription HUES48 Cell Line embryonic stem cell
37 chr6:37269200-37274200 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr6:37269200-37274400 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr6:37269200-37275000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr6:37269200-37275000 Strong transcription Stomach Smooth Muscle stomach
41 chr6:37269200-37275400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:37269200-37275800 Strong transcription HepG2 liver
43 chr6:37269200-37276200 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr6:37269200-37276200 Strong transcription Duodenum Mucosa Duodenum
45 chr6:37269400-37273200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
46 chr6:37269400-37274800 Strong transcription Fetal Intestine Large intestine
47 chr6:37269400-37275000 Strong transcription Primary T regulatory cells fromperipheralblood blood
48 chr6:37269600-37273800 Strong transcription Fetal Muscle Leg muscle
49 chr6:37269600-37274200 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr6:37269600-37274200 Strong transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015