Variant report

Variant	rs12202421
Chromosome Location	chr6:144462116-144462117
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1040464	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6570607	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6570609	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs67007116	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6916177	1.00[CEU][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7747493	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7769877	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9496876	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs990308	0.85[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:144460000-144466000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr6:144460400-144463200	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr6:144461000-144463400	Active TSS	Primary B cells from cord blood	blood
4	chr6:144461600-144462800	Flanking Active TSS	GM12878-XiMat	blood
5	chr6:144461600-144463000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
6	chr6:144461800-144462200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr6:144461800-144463400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
8	chr6:144462000-144463800	Active TSS	Primary hematopoietic stem cells	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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