Variant report

Variant	rs12206870
Chromosome Location	chr6:107159837-107159838
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:107147525..107149778-chr6:107158008..107160108,2	K562	blood:
2	chr6:107147848..107149506-chr6:107159132..107161545,2	MCF-7	breast:

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12205298	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12206866	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12214701	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1970594	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2748289	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2748290	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6940677	0.81[EUR][1000 genomes]
rs9372141	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9373893	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9373894	0.96[EUR][1000 genomes]
rs9384631	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9386583	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9386584	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386585	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386587	0.96[EUR][1000 genomes]
rs9398104	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9398107	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400053	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400055	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400057	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107151000-107162200	Weak transcription	Fetal Kidney	kidney
2	chr6:107152400-107161400	Weak transcription	Pancreas	Pancrea
3	chr6:107154200-107160400	Weak transcription	Primary B cells from cord blood	blood
4	chr6:107158400-107161200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr6:107158600-107162200	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr6:107158800-107160800	Weak transcription	Primary B cells from peripheral blood	blood
7	chr6:107158800-107163600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr6:107158800-107169200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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