Variant report

Variant	rs9400053
Chromosome Location	chr6:107151977-107151978
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12205298	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12206866	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12206870	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12214701	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1970594	0.85[CEU][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2748289	1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2748290	1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6940677	0.81[EUR][1000 genomes]
rs9372141	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9373893	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9373894	0.96[EUR][1000 genomes]
rs9384631	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9386583	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9386584	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386585	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9386587	0.96[EUR][1000 genomes]
rs9398104	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9398107	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400055	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9400057	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:107142600-107157400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:107149000-107152800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr6:107149800-107152000	Enhancers	Stomach Mucosa	stomach
4	chr6:107150000-107152200	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr6:107150000-107152400	Enhancers	Pancreas	Pancrea
6	chr6:107151000-107152600	Weak transcription	Esophagus	oesophagus
7	chr6:107151000-107153000	Enhancers	Primary B cells from cord blood	blood
8	chr6:107151000-107154400	Enhancers	Primary B cells from peripheral blood	blood
9	chr6:107151000-107162200	Weak transcription	Fetal Kidney	kidney
10	chr6:107151600-107152200	Flanking Active TSS	Liver	Liver

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