Variant report

Variant rs12211168
Chromosome Location chr6:54741606-54741607
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:54727200-54748800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:54727400-54743800 Weak transcription Pancreas Pancrea
3 chr6:54730400-54743800 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr6:54734600-54741800 Weak transcription Placenta Amnion Placenta Amnion
5 chr6:54736800-54741800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr6:54737200-54742200 Enhancers HMEC breast
7 chr6:54737200-54746400 Enhancers Hela-S3 cervix
8 chr6:54737600-54755800 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr6:54739400-54742400 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:54739400-54742600 Weak transcription Stomach Mucosa stomach
11 chr6:54739800-54742000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr6:54739800-54763000 Weak transcription Small Intestine intestine
13 chr6:54740000-54741800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr6:54740000-54742400 Weak transcription Fetal Intestine Small intestine
15 chr6:54740200-54741800 Weak transcription Fetal Intestine Large intestine
16 chr6:54740200-54742000 Weak transcription Duodenum Mucosa Duodenum
17 chr6:54740600-54743000 Weak transcription Fetal Kidney kidney
18 chr6:54740800-54742200 Genic enhancers NHEK skin
19 chr6:54740800-54742400 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr6:54741400-54741800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr6:54741400-54743200 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr6:54741600-54744600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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