Variant report

Variant	rs12213933
Chromosome Location	chr6:73753513-73753514
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17751765	1.00[CEU][hapmap]
rs57873383	1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7741782	1.00[JPT][hapmap]
rs7742112	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3410973	chr6:73716033-74419545	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	191 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73743000-73772000	Weak transcription	HSMM	muscle
2	chr6:73746400-73759600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr6:73749000-73765200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr6:73749600-73755000	Weak transcription	Primary B cells from peripheral blood	blood
5	chr6:73750200-73764000	Weak transcription	Primary hematopoietic stem cells	blood
6	chr6:73750400-73754600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:73751200-73755200	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr6:73751400-73755200	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr6:73751400-73759000	Weak transcription	Aorta	Aorta
10	chr6:73751600-73753600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
11	chr6:73751800-73754600	Weak transcription	HSMMtube	muscle
12	chr6:73751800-73754800	Strong transcription	Primary B cells from cord blood	blood
13	chr6:73752200-73757400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr6:73752600-73760800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr6:73753000-73754800	Strong transcription	Primary T cells from cord blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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