Variant report

Variant rs12216828
Chromosome Location chr8:125846960-125846961
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:125836400-125850800 Weak transcription Right Atrium heart
2 chr8:125845000-125847400 Enhancers Fetal Brain Male brain
3 chr8:125845000-125847600 Enhancers Fetal Muscle Leg muscle
4 chr8:125845200-125847600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr8:125845400-125847800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
6 chr8:125845600-125847800 Enhancers Brain Germinal Matrix brain
7 chr8:125845600-125849800 Enhancers Cortex derived primary cultured neurospheres brain
8 chr8:125845800-125847200 Enhancers Left Ventricle heart
9 chr8:125845800-125847400 Enhancers Fetal Brain Female brain
10 chr8:125845800-125847400 Enhancers Skeletal Muscle Male skeletal muscle
11 chr8:125846000-125848000 Enhancers Brain Cingulate Gyrus brain
12 chr8:125846000-125852200 Weak transcription K562 blood
13 chr8:125846200-125847200 Enhancers Placenta Amnion Placenta Amnion
14 chr8:125846200-125847600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
15 chr8:125846200-125847800 Enhancers Brain Inferior Temporal Lobe brain
16 chr8:125846200-125848400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr8:125846400-125847400 Flanking Active TSS Brain Hippocampus Middle brain
18 chr8:125846400-125847400 Enhancers Fetal Heart heart
19 chr8:125846400-125847400 Enhancers Fetal Lung lung
20 chr8:125846400-125847400 Enhancers Rectal Smooth Muscle rectum
21 chr8:125846400-125847600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr8:125846400-125847600 Enhancers Brain Anterior Caudate brain
23 chr8:125846400-125847800 Enhancers Brain Angular Gyrus brain
24 chr8:125846400-125848000 Enhancers Brain Substantia Nigra brain
25 chr8:125846600-125847000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr8:125846600-125847000 Enhancers Skeletal Muscle Female skeletal muscle
27 chr8:125846600-125847000 Flanking Active TSS Stomach Smooth Muscle stomach
28 chr8:125846600-125847200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr8:125846600-125847200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr8:125846600-125847200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr8:125846600-125847200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr8:125846600-125847200 Enhancers Esophagus oesophagus
33 chr8:125846600-125847200 Enhancers Fetal Stomach stomach
34 chr8:125846600-125847400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr8:125846600-125847400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr8:125846600-125847800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr8:125846600-125848400 Enhancers Right Ventricle heart
38 chr8:125846600-125850000 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr8:125846800-125847000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr8:125846800-125847000 Enhancers Placenta Placenta
41 chr8:125846800-125847200 Enhancers H1 Cell Line embryonic stem cell
42 chr8:125846800-125847200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr8:125846800-125847200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr8:125846800-125847200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
45 chr8:125846800-125847400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr8:125846800-125847400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr8:125846800-125847400 Enhancers Adipose Nuclei Adipose
48 chr8:125846800-125847400 Enhancers Duodenum Smooth Muscle Duodenum
49 chr8:125846800-125847400 Bivalent Enhancer Fetal Muscle Trunk muscle
50 chr8:125846800-125847400 Enhancers HMEC breast

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