Variant report

Variant rs12223627
Chromosome Location chr11:62368557-62368558
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:62366400-62368800 Flanking Active TSS Primary B cells from cord blood blood
2 chr11:62367000-62368600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr11:62367000-62369200 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
4 chr11:62367200-62368600 Flanking Active TSS Adipose Nuclei Adipose
5 chr11:62367200-62368600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
6 chr11:62367200-62368600 Flanking Active TSS Stomach Smooth Muscle stomach
7 chr11:62367200-62369200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
8 chr11:62367400-62368600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
9 chr11:62367400-62368600 Flanking Active TSS Liver Liver
10 chr11:62367400-62369600 Active TSS HMEC breast
11 chr11:62367400-62369600 Active TSS NHEK skin
12 chr11:62367600-62368600 Flanking Active TSS Placenta Placenta
13 chr11:62367600-62370000 Active TSS Right Atrium heart
14 chr11:62367600-62370400 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr11:62367600-62370600 Active TSS Ovary ovary
16 chr11:62367600-62370800 Active TSS Aorta Aorta
17 chr11:62367800-62368600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
18 chr11:62367800-62369400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
19 chr11:62367800-62369400 Active TSS NH-A brain
20 chr11:62367800-62369600 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr11:62367800-62369600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
22 chr11:62367800-62369600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
23 chr11:62367800-62369600 Active TSS Muscle Satellite Cultured Cells --
24 chr11:62367800-62369600 Active TSS Lung lung
25 chr11:62367800-62369600 Active TSS Thymus Thymus
26 chr11:62367800-62370000 Active TSS ES-I3 Cell Line embryonic stem cell
27 chr11:62367800-62370000 Active TSS HUES6 Cell Line embryonic stem cell
28 chr11:62367800-62370200 Active TSS iPS-20b Cell Line embryonic stem cell
29 chr11:62367800-62370200 Active TSS Breast Myoepithelial Primary Cells Breast
30 chr11:62367800-62370200 Active TSS Fetal Kidney kidney
31 chr11:62367800-62370600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
32 chr11:62367800-62370600 Active TSS Psoas Muscle Psoas
33 chr11:62368000-62368600 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
34 chr11:62368000-62368600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr11:62368000-62369400 Active TSS Primary T killer memory cells from peripheral blood blood
36 chr11:62368000-62369600 Active TSS Primary T helper naive cells from peripheral blood blood
37 chr11:62368000-62369600 Active TSS Primary T helper cells PMA-I stimulated --
38 chr11:62368000-62369600 Active TSS GM12878-XiMat blood
39 chr11:62368000-62369600 Active TSS NHLF lung
40 chr11:62368000-62370000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr11:62368000-62370000 Active TSS Gastric stomach
42 chr11:62368000-62370000 Active TSS Placenta Amnion Placenta Amnion
43 chr11:62368000-62370200 Active TSS HUES48 Cell Line embryonic stem cell
44 chr11:62368200-62368600 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
45 chr11:62368200-62368600 Flanking Active TSS Primary B cells from peripheral blood blood
46 chr11:62368200-62368600 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
47 chr11:62368200-62368600 Flanking Active TSS Fetal Muscle Trunk muscle
48 chr11:62368200-62368800 Bivalent/Poised TSS HepG2 liver
49 chr11:62368200-62369400 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
50 chr11:62368200-62369600 Active TSS H1 Cell Line embryonic stem cell

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