Variant report

Variant rs2849030
Chromosome Location chr11:62366986-62366987
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:62359800-62368200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr11:62360200-62367200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr11:62360200-62367200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr11:62360400-62367400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr11:62364600-62367200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr11:62365000-62367000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr11:62365000-62368000 Transcr. at gene 5' and 3' Hela-S3 cervix
8 chr11:62365200-62368200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr11:62365400-62367200 Weak transcription Small Intestine intestine
10 chr11:62365400-62367400 Genic enhancers Skeletal Muscle Female skeletal muscle
11 chr11:62365600-62367800 Transcr. at gene 5' and 3' GM12878-XiMat blood
12 chr11:62365800-62367200 Genic enhancers Fetal Muscle Trunk muscle
13 chr11:62365800-62367400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr11:62366000-62367200 Genic enhancers Fetal Muscle Leg muscle
15 chr11:62366000-62367400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr11:62366000-62367400 Weak transcription H9 Cell Line embryonic stem cell
17 chr11:62366000-62367400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
18 chr11:62366000-62367400 Genic enhancers Fetal Stomach stomach
19 chr11:62366000-62368000 Weak transcription Gastric stomach
20 chr11:62366000-62368200 Transcr. at gene 5' and 3' K562 blood
21 chr11:62366200-62367000 Genic enhancers HUES64 Cell Line embryonic stem cell
22 chr11:62366200-62367000 Transcr. at gene 5' and 3' Primary B cells from peripheral blood blood
23 chr11:62366200-62367200 Enhancers Fetal Lung lung
24 chr11:62366200-62367400 Genic enhancers H1 Cell Line embryonic stem cell
25 chr11:62366200-62367400 Enhancers Primary neutrophils fromperipheralblood blood
26 chr11:62366200-62367400 Genic enhancers Fetal Intestine Small intestine
27 chr11:62366200-62367400 Genic enhancers Rectal Mucosa Donor 31 rectum
28 chr11:62366200-62367600 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr11:62366200-62367800 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
30 chr11:62366200-62367800 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
31 chr11:62366200-62367800 Transcr. at gene 5' and 3' HUVEC blood vessel
32 chr11:62366200-62367800 Transcr. at gene 5' and 3' NH-A brain
33 chr11:62366200-62367800 Transcr. at gene 5' and 3' Osteobl bone
34 chr11:62366200-62368000 Transcr. at gene 5' and 3' Fetal Thymus thymus
35 chr11:62366200-62368200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
36 chr11:62366200-62368200 Transcr. at gene 5' and 3' A549 lung
37 chr11:62366200-62368200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr11:62366200-62368400 Flanking Active TSS Primary hematopoietic stem cells blood
39 chr11:62366200-62368400 Transcr. at gene 5' and 3' Dnd41 blood
40 chr11:62366400-62367000 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr11:62366400-62367000 Genic enhancers iPS-18 Cell Line embryonic stem cell
42 chr11:62366400-62367000 Enhancers Primary mononuclear cells fromperipheralblood Blood
43 chr11:62366400-62367000 Flanking Active TSS Brain Angular Gyrus brain
44 chr11:62366400-62367000 Transcr. at gene 5' and 3' NHEK skin
45 chr11:62366400-62367200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr11:62366400-62367200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr11:62366400-62367200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr11:62366400-62367200 Enhancers Fetal Heart heart
49 chr11:62366400-62367200 Active TSS Fetal Kidney kidney
50 chr11:62366400-62367400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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