Variant report
| Variant | rs12227480 |
|---|---|
| Chromosome Location | chr12:26143130-26143131 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:26117600-26150000 | Weak transcription | Hela-S3 | cervix |
| 2 | chr12:26131000-26145400 | Weak transcription | Lung | lung |
| 3 | chr12:26131000-26146000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 4 | chr12:26131000-26146200 | Weak transcription | HSMM | muscle |
| 5 | chr12:26132400-26146800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 6 | chr12:26133000-26144600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 7 | chr12:26133000-26144600 | Weak transcription | HMEC | breast |
| 8 | chr12:26133000-26144600 | Weak transcription | NHEK | skin |
| 9 | chr12:26133000-26145200 | Weak transcription | NH-A | brain |
| 10 | chr12:26133000-26145200 | Weak transcription | Osteobl | bone |
| 11 | chr12:26134200-26148000 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 12 | chr12:26134400-26145400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 13 | chr12:26134400-26145400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 14 | chr12:26134400-26147800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 15 | chr12:26137200-26143200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 16 | chr12:26138400-26146800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 17 | chr12:26138800-26145400 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 18 | chr12:26139200-26145200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 19 | chr12:26139200-26147400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 20 | chr12:26139400-26143800 | Weak transcription | Brain Anterior Caudate | brain |
| 21 | chr12:26139400-26146000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr12:26139400-26150600 | Weak transcription | Brain Angular Gyrus | brain |
| 23 | chr12:26139600-26144400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr12:26139600-26144400 | Weak transcription | Left Ventricle | heart |
| 25 | chr12:26139600-26145800 | Weak transcription | Brain Substantia Nigra | brain |
| 26 | chr12:26139600-26160000 | Weak transcription | Pancreas | Pancrea |
| 27 | chr12:26139800-26144600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 28 | chr12:26139800-26145000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 29 | chr12:26139800-26146800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr12:26140200-26144400 | Weak transcription | Right Ventricle | heart |
| 31 | chr12:26140200-26145400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 32 | chr12:26140200-26145600 | Weak transcription | Aorta | Aorta |
| 33 | chr12:26140200-26147600 | Weak transcription | Ovary | ovary |
| 34 | chr12:26140400-26144400 | Weak transcription | Right Atrium | heart |
| 35 | chr12:26140400-26144400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 36 | chr12:26141200-26143600 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 37 | chr12:26141400-26144600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 38 | chr12:26141600-26143200 | Enhancers | Rectal Smooth Muscle | rectum |
| 39 | chr12:26141800-26144400 | Weak transcription | NHDF-Ad | bronchial |
| 40 | chr12:26141800-26144600 | Weak transcription | Fetal Heart | heart |
| 41 | chr12:26141800-26144800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 42 | chr12:26141800-26146800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 43 | chr12:26142000-26144400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 44 | chr12:26142000-26145200 | Weak transcription | Fetal Lung | lung |
| 45 | chr12:26142000-26149000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 46 | chr12:26142200-26143800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 47 | chr12:26142200-26144600 | Weak transcription | Psoas Muscle | Psoas |
| 48 | chr12:26142200-26145000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 49 | chr12:26142200-26145000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 50 | chr12:26142200-26145200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
