Variant report
| Variant | rs12228116 |
|---|---|
| Chromosome Location | chr12:29507285-29507286 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:29427200-29527400 | Weak transcription | Small Intestine | intestine |
| 2 | chr12:29462600-29533000 | Weak transcription | Aorta | Aorta |
| 3 | chr12:29470800-29508400 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 4 | chr12:29470800-29532800 | Weak transcription | Right Ventricle | heart |
| 5 | chr12:29473800-29522600 | Weak transcription | NHEK | skin |
| 6 | chr12:29476200-29509400 | Weak transcription | Spleen | Spleen |
| 7 | chr12:29476200-29512800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 8 | chr12:29476200-29533400 | Weak transcription | Pancreas | Pancrea |
| 9 | chr12:29476400-29509600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 10 | chr12:29476400-29532600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 11 | chr12:29476400-29533200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 12 | chr12:29477000-29517800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr12:29483400-29518000 | Weak transcription | Brain Hippocampus Middle | brain |
| 14 | chr12:29484200-29532000 | Weak transcription | Fetal Brain Male | brain |
| 15 | chr12:29485600-29533400 | Weak transcription | Gastric | stomach |
| 16 | chr12:29486800-29528600 | Weak transcription | Psoas Muscle | Psoas |
| 17 | chr12:29487000-29533000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 18 | chr12:29488800-29532000 | Weak transcription | NHLF | lung |
| 19 | chr12:29489600-29525600 | Strong transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 20 | chr12:29489800-29510000 | Weak transcription | Brain Germinal Matrix | brain |
| 21 | chr12:29490000-29533400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr12:29490000-29533400 | Weak transcription | Esophagus | oesophagus |
| 23 | chr12:29490400-29524600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 24 | chr12:29491000-29511400 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 25 | chr12:29492400-29511800 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 26 | chr12:29492400-29518000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 27 | chr12:29492800-29511800 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 28 | chr12:29492800-29519000 | Weak transcription | HepG2 | liver |
| 29 | chr12:29493600-29532600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 30 | chr12:29494400-29517800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 31 | chr12:29494400-29532400 | Weak transcription | Brain Substantia Nigra | brain |
| 32 | chr12:29494600-29509000 | Weak transcription | Lung | lung |
| 33 | chr12:29494600-29511800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 34 | chr12:29494600-29532800 | Weak transcription | Colonic Mucosa | Colon |
| 35 | chr12:29496400-29509200 | Weak transcription | Left Ventricle | heart |
| 36 | chr12:29496400-29518000 | Weak transcription | Brain Anterior Caudate | brain |
| 37 | chr12:29496400-29518000 | Weak transcription | Thymus | Thymus |
| 38 | chr12:29496400-29532200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 39 | chr12:29496600-29517800 | Weak transcription | NH-A | brain |
| 40 | chr12:29496800-29508600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 41 | chr12:29496800-29519000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 42 | chr12:29497000-29509000 | Weak transcription | HMEC | breast |
| 43 | chr12:29497400-29532400 | Weak transcription | Fetal Heart | heart |
| 44 | chr12:29497600-29518200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 45 | chr12:29498000-29515800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 46 | chr12:29498800-29507800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 47 | chr12:29498800-29509000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr12:29499000-29507600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 49 | chr12:29499000-29532400 | Weak transcription | Fetal Brain Female | brain |
| 50 | chr12:29499200-29510600 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
