The 2.0 version of rSNPBase

Variant report

Variant rs12231358
Chromosome Location chr12:118792295-118792296
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:118720800-118793600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr12:118774000-118792400 Weak transcription Dnd41 blood
3 chr12:118775800-118792600 Weak transcription Muscle Satellite Cultured Cells --
4 chr12:118781000-118793600 Weak transcription NHEK skin
5 chr12:118783600-118793000 Weak transcription Osteobl bone
6 chr12:118783600-118794400 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr12:118784200-118793600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr12:118785000-118792600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr12:118785000-118794600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr12:118785400-118793000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr12:118785400-118794600 Weak transcription Aorta Aorta
12 chr12:118786000-118793400 Weak transcription Brain Inferior Temporal Lobe brain
13 chr12:118786000-118794400 Weak transcription Primary T regulatory cells fromperipheralblood blood
14 chr12:118786200-118793400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr12:118786200-118793400 Weak transcription Stomach Mucosa stomach
16 chr12:118786200-118793600 Weak transcription Brain Hippocampus Middle brain
17 chr12:118786200-118793600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr12:118786200-118793800 Weak transcription Colon Smooth Muscle Colon
19 chr12:118786600-118793800 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr12:118789200-118793200 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr12:118789200-118793600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr12:118789400-118793200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr12:118789600-118793200 Weak transcription Duodenum Mucosa Duodenum
24 chr12:118790400-118792600 Strong transcription Primary T cells from cord blood blood
25 chr12:118790400-118792600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr12:118790600-118792400 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr12:118791000-118792400 Enhancers Primary monocytes fromperipheralblood blood
28 chr12:118791000-118793000 Weak transcription NH-A brain
29 chr12:118791000-118793200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr12:118791000-118793200 Weak transcription Liver Liver
31 chr12:118791200-118793400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr12:118791200-118793400 Enhancers NHDF-Ad bronchial
33 chr12:118791400-118792800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
34 chr12:118791400-118793400 Weak transcription Brain Substantia Nigra brain
35 chr12:118791600-118792600 Strong transcription Primary B cells from peripheral blood blood
36 chr12:118791600-118792600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr12:118791600-118793000 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr12:118791600-118793200 Weak transcription Brain Angular Gyrus brain
39 chr12:118791600-118793200 Weak transcription NHLF lung
40 chr12:118791600-118793400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr12:118791600-118793400 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr12:118791600-118794600 Weak transcription HepG2 liver
43 chr12:118791600-118797400 Weak transcription Gastric stomach
44 chr12:118791800-118793200 ZNF genes & repeats GM12878-XiMat blood
45 chr12:118792000-118792400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr12:118792000-118792400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr12:118792000-118792800 ZNF genes & repeats Fetal Intestine Small intestine
48 chr12:118792000-118794200 ZNF genes & repeats K562 blood
49 chr12:118792200-118792400 Strong transcription HSMM muscle
50 chr12:118792200-118792600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015