The 2.0 version of rSNPBase

Variant report

Variant rs61943365
Chromosome Location chr12:118776971-118776972
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:118720800-118793600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr12:118746000-118783200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr12:118746200-118785000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr12:118752800-118783200 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr12:118754600-118782200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr12:118767400-118778600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr12:118768800-118790400 Weak transcription Primary T cells from cord blood blood
8 chr12:118769000-118778000 Weak transcription Stomach Mucosa stomach
9 chr12:118769000-118783200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr12:118769000-118783200 Weak transcription Brain Anterior Caudate brain
11 chr12:118769000-118784000 Weak transcription Duodenum Mucosa Duodenum
12 chr12:118769200-118782000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr12:118769200-118783200 Weak transcription Gastric stomach
14 chr12:118769200-118785000 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr12:118769200-118785800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr12:118769200-118791000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr12:118769800-118782600 Weak transcription Fetal Intestine Small intestine
18 chr12:118770000-118785200 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr12:118770600-118780400 Weak transcription Primary B cells from peripheral blood blood
20 chr12:118773600-118780400 Weak transcription Primary T cells fromperipheralblood blood
21 chr12:118773800-118777000 Enhancers NHDF-Ad bronchial
22 chr12:118774000-118792400 Weak transcription Dnd41 blood
23 chr12:118774200-118782000 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr12:118774800-118783200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr12:118775000-118777000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
26 chr12:118775400-118777000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr12:118775800-118777000 Genic enhancers Primary hematopoietic stem cells short term culture blood
28 chr12:118775800-118777000 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr12:118775800-118778200 Enhancers A549 lung
30 chr12:118775800-118783000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr12:118775800-118792000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr12:118775800-118792600 Weak transcription Muscle Satellite Cultured Cells --
33 chr12:118776000-118782000 Weak transcription Primary B cells from cord blood blood
34 chr12:118776200-118777200 Enhancers Primary T helper cells fromperipheralblood blood
35 chr12:118776200-118777200 Enhancers Primary Natural Killer cells fromperipheralblood blood
36 chr12:118776200-118784400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr12:118776200-118792000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr12:118776400-118783200 Weak transcription NHLF lung
39 chr12:118776600-118777000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr12:118776600-118777000 Enhancers HUES48 Cell Line embryonic stem cell
41 chr12:118776600-118777000 Enhancers Primary T helper cells PMA-I stimulated --
42 chr12:118776600-118777000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr12:118776600-118777000 Flanking Active TSS GM12878-XiMat blood
44 chr12:118776600-118777000 Flanking Active TSS K562 blood
45 chr12:118776600-118777400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr12:118776600-118778000 Enhancers Primary hematopoietic stem cells blood
47 chr12:118776800-118777000 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr12:118776800-118777000 Enhancers Primary neutrophils fromperipheralblood blood
49 chr12:118776800-118777000 Enhancers Brain Inferior Temporal Lobe brain
50 chr12:118776800-118778600 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015