Variant report

Variant	rs12238248
Chromosome Location	chr9:73453148-73453149
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10511988	0.94[ASN][1000 genomes]
rs11142615	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11142621	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11142622	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11142623	1.00[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11142624	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13290608	0.98[ASN][1000 genomes]
rs1337024	0.94[ASN][1000 genomes]
rs34728483	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35387614	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35420371	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4311707	0.94[ASN][1000 genomes]
rs60993053	0.98[ASN][1000 genomes]
rs67152149	0.98[ASN][1000 genomes]
rs73467853	0.94[ASN][1000 genomes]
rs7862322	0.94[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
2	chr9:73438600-73456800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr9:73442200-73459800	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr9:73443000-73453400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr9:73448200-73454800	Weak transcription	Gastric	stomach
6	chr9:73448200-73473600	Weak transcription	Fetal Kidney	kidney
7	chr9:73448400-73459200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr9:73448400-73469000	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr9:73448600-73457000	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr9:73449200-73455400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr9:73449400-73455200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr9:73449600-73453400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr9:73450600-73477600	Weak transcription	Ovary	ovary
14	chr9:73452000-73469600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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