Variant report

Variant	rs60993053
Chromosome Location	chr9:73445009-73445010
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:73444671..73446779-chr9:73448314..73450749,2	K562	blood:

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10511988	0.93[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11142615	0.98[ASN][1000 genomes]
rs11142621	0.97[ASN][1000 genomes]
rs11142622	0.96[ASN][1000 genomes]
rs11142623	0.97[ASN][1000 genomes]
rs11142624	0.97[ASN][1000 genomes]
rs12238248	0.98[ASN][1000 genomes]
rs13290608	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1337024	0.93[ASN][1000 genomes]
rs34728483	0.98[ASN][1000 genomes]
rs35387614	0.98[ASN][1000 genomes]
rs35420371	0.98[ASN][1000 genomes]
rs4311707	0.95[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs67152149	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73467853	0.93[ASN][1000 genomes]
rs73647170	0.81[AFR][1000 genomes]
rs7862322	0.94[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73418200-73447400	Weak transcription	Fetal Kidney	kidney
2	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
3	chr9:73437400-73447200	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr9:73438600-73449000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr9:73438600-73456800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr9:73440400-73447200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr9:73442200-73459800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr9:73443000-73453400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr9:73444000-73446600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr9:73444000-73448600	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr9:73444200-73446000	Enhancers	Brain Substantia Nigra	brain
12	chr9:73444400-73445200	Enhancers	Brain Germinal Matrix	brain
13	chr9:73444400-73445600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr9:73444400-73446200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr9:73444600-73445200	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr9:73444600-73445600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
17	chr9:73444600-73445800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr9:73444600-73446000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr9:73444600-73446000	Enhancers	Brain Hippocampus Middle	brain
20	chr9:73444800-73445200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr9:73444800-73445200	Enhancers	iPS-20b Cell Line	embryonic stem cell
22	chr9:73444800-73446000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr9:73445000-73445200	Enhancers	HUES48 Cell Line	embryonic stem cell

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