The 2.0 version of rSNPBase

Variant report

Variant rs12239220
Chromosome Location chr1:172794361-172794362
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172788400-172795400 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr1:172788800-172797000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:172789000-172795400 Weak transcription Duodenum Mucosa Duodenum
4 chr1:172789000-172795400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:172789000-172795400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr1:172789000-172796600 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:172789000-172797000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:172789400-172795400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr1:172790000-172795200 Weak transcription Primary B cells from peripheral blood blood
10 chr1:172790200-172794400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:172790600-172795200 Weak transcription Primary B cells from cord blood blood
12 chr1:172790800-172795400 Weak transcription A549 lung
13 chr1:172791000-172795200 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr1:172791200-172795200 Weak transcription Primary monocytes fromperipheralblood blood
15 chr1:172791200-172795400 Weak transcription Fetal Lung lung
16 chr1:172791200-172806200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:172791400-172795400 Weak transcription Brain Hippocampus Middle brain
18 chr1:172791400-172795400 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:172791800-172795200 Weak transcription Primary hematopoietic stem cells blood
20 chr1:172792000-172795000 Weak transcription Dnd41 blood
21 chr1:172792000-172795600 Weak transcription K562 blood
22 chr1:172793200-172795600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr1:172793600-172795200 Weak transcription Rectal Smooth Muscle rectum
24 chr1:172793600-172795400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr1:172793600-172795400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:172793600-172795600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:172793800-172794800 Weak transcription HSMM muscle
28 chr1:172793800-172794800 Weak transcription NHDF-Ad bronchial
29 chr1:172793800-172795000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:172793800-172795000 Weak transcription NHLF lung
31 chr1:172793800-172795400 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr1:172793800-172795400 Weak transcription Adipose Nuclei Adipose
33 chr1:172793800-172795400 Weak transcription Osteobl bone
34 chr1:172793800-172795600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:172794000-172795000 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr1:172794000-172795200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr1:172794000-172795400 Weak transcription Muscle Satellite Cultured Cells --
38 chr1:172794200-172795000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:172794200-172795400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:172794200-172795400 Weak transcription HSMMtube muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015