The 2.0 version of rSNPBase

Variant report

Variant rs12240119
Chromosome Location chr1:185203725-185203726
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:185127600-185218200 Weak transcription Right Ventricle heart
2 chr1:185138000-185204000 Weak transcription Colon Smooth Muscle Colon
3 chr1:185170800-185218200 Weak transcription Pancreas Pancrea
4 chr1:185174000-185207200 Weak transcription NHDF-Ad bronchial
5 chr1:185175600-185217000 Weak transcription Fetal Stomach stomach
6 chr1:185178400-185208600 Weak transcription Small Intestine intestine
7 chr1:185190200-185204200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr1:185192400-185206200 Weak transcription Brain Substantia Nigra brain
9 chr1:185192400-185208200 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr1:185192400-185209000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:185192600-185204800 Weak transcription Fetal Brain Female brain
12 chr1:185192600-185205800 Weak transcription Duodenum Mucosa Duodenum
13 chr1:185192600-185207400 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr1:185192600-185218600 Weak transcription Aorta Aorta
15 chr1:185192600-185221000 Weak transcription Fetal Intestine Small intestine
16 chr1:185193400-185208000 Weak transcription Stomach Smooth Muscle stomach
17 chr1:185193600-185203800 Weak transcription Fetal Intestine Large intestine
18 chr1:185193600-185203800 Weak transcription Fetal Muscle Leg muscle
19 chr1:185193600-185204000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr1:185193600-185208000 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:185193600-185213200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr1:185193600-185213400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:185193600-185214600 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr1:185193600-185219200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr1:185193600-185219400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:185193800-185205200 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:185193800-185206200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:185193800-185206400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr1:185193800-185220400 Weak transcription Brain Hippocampus Middle brain
30 chr1:185193800-185263600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:185194000-185218600 Weak transcription Lung lung
32 chr1:185194200-185213400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:185196600-185209200 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr1:185197200-185218200 Weak transcription Left Ventricle heart
35 chr1:185197600-185220400 Weak transcription Ovary ovary
36 chr1:185198800-185210400 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:185199800-185213200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:185201000-185204000 Weak transcription Adipose Nuclei Adipose
39 chr1:185202000-185204200 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr1:185202000-185205200 Weak transcription Brain Germinal Matrix brain
41 chr1:185202200-185203800 Weak transcription Primary B cells from peripheral blood blood
42 chr1:185202200-185203800 Weak transcription Primary T cells fromperipheralblood blood
43 chr1:185202200-185203800 Weak transcription Liver Liver
44 chr1:185202400-185204000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:185202400-185206000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:185202400-185218800 Weak transcription Brain Anterior Caudate brain
47 chr1:185203000-185204000 Strong transcription Primary T cells from cord blood blood
48 chr1:185203400-185204000 Enhancers HepG2 liver

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Last update: Aug 31, 2015