Variant report

Variant	rs12246132
Chromosome Location	chr10:91419245-91419246
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:91406958..91409221-chr10:91418056..91419890,2	MCF-7	breast:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10047318	1.00[AMR][1000 genomes]
rs12246192	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12247535	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12249849	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12250250	1.00[AFR][1000 genomes]
rs12253906	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs12255894	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12258258	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12259477	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12260995	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:91418400-91419400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr10:91418400-91419400	Enhancers	HSMM	muscle
3	chr10:91418400-91419600	Enhancers	Fetal Muscle Leg	muscle
4	chr10:91418400-91419600	Enhancers	NH-A	brain
5	chr10:91418400-91419800	Enhancers	NHLF	lung
6	chr10:91418600-91419600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
7	chr10:91418600-91420000	Enhancers	GM12878-XiMat	blood
8	chr10:91418800-91419400	Enhancers	HSMMtube	muscle
9	chr10:91418800-91419600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr10:91418800-91419600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
11	chr10:91418800-91419600	Enhancers	Fetal Stomach	stomach
12	chr10:91418800-91419600	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr10:91419000-91419400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr10:91419000-91419600	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr10:91419000-91419600	Enhancers	Adipose Nuclei	Adipose
16	chr10:91419000-91419600	Enhancers	Fetal Lung	lung
17	chr10:91419000-91419800	Enhancers	Psoas Muscle	Psoas
18	chr10:91419200-91419400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr10:91419200-91419600	Enhancers	Fetal Muscle Trunk	muscle
20	chr10:91419200-91419600	Enhancers	Left Ventricle	heart
21	chr10:91419200-91419600	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr10:91419200-91419600	Flanking Active TSS	NHDF-Ad	bronchial
23	chr10:91419200-91419600	Flanking Active TSS	Osteobl	bone
24	chr10:91419200-91419800	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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