Variant report

Variant	rs12246165
Chromosome Location	chr10:44186826-44186827
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:44185584..44187183-chr10:44191790..44193996,2	K562	blood:
2	chr10:44173211..44175756-chr10:44184314..44186963,2	K562	blood:
3	chr10:44185602..44188536-chr10:44195679..44198454,2	MCF-7	breast:
4	chr10:44183379..44187369-chr10:44190252..44193395,4	MCF-7	breast:
5	chr10:44185266..44187745-chr10:44193521..44195078,2	MCF-7	breast:
6	chr10:44185406..44187428-chr10:44683706..44685652,2	MCF-7	breast:
7	chr10:44185118..44187930-chr10:44667702..44670061,3	MCF-7	breast:
8	chr10:44173211..44175882-chr10:44184314..44186858,2	K562	blood:

No data

rs_ID	r²[population]
rs11238589	1.00[MEX][hapmap]
rs11238596	1.00[MEX][hapmap]
rs11238603	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11238611	0.86[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];0.94[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11814874	0.82[AFR][1000 genomes]

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44185000-44187200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr10:44186200-44187000	Weak transcription	Aorta	Aorta
3	chr10:44186200-44187000	Weak transcription	Left Ventricle	heart
4	chr10:44186200-44187000	Weak transcription	Ovary	ovary
5	chr10:44186200-44187200	Enhancers	Fetal Muscle Leg	muscle
6	chr10:44186200-44187200	Weak transcription	HSMMtube	muscle
7	chr10:44186200-44187600	Enhancers	Fetal Brain Male	brain
8	chr10:44186200-44188000	Enhancers	Right Ventricle	heart
9	chr10:44186200-44188000	Enhancers	NHLF	lung
10	chr10:44186200-44188000	Enhancers	Osteobl	bone
11	chr10:44186200-44188600	Enhancers	Fetal Heart	heart
12	chr10:44186200-44188800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr10:44186200-44188800	Weak transcription	Spleen	Spleen
14	chr10:44186200-44189400	Weak transcription	Psoas Muscle	Psoas
15	chr10:44186200-44191600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr10:44186200-44193000	Weak transcription	Right Atrium	heart
17	chr10:44186400-44187600	Enhancers	Muscle Satellite Cultured Cells	--
18	chr10:44186400-44187800	Weak transcription	Fetal Brain Female	brain
19	chr10:44186400-44188000	Enhancers	Adipose Nuclei	Adipose
20	chr10:44186400-44188000	Enhancers	Skeletal Muscle Female	skeletal muscle
21	chr10:44186400-44188200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr10:44186400-44188200	Bivalent Enhancer	Fetal Lung	lung
23	chr10:44186600-44187200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr10:44186600-44187600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr10:44186600-44188000	Enhancers	NHDF-Ad	bronchial
26	chr10:44186800-44187200	Enhancers	Placenta Amnion	Placenta Amnion
27	chr10:44186800-44187600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr10:44186800-44187800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr10:44186800-44187800	Enhancers	Fetal Muscle Trunk	muscle
30	chr10:44186800-44188000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr10:44186800-44188000	Enhancers	Lung	lung
32	chr10:44186800-44188000	Enhancers	Pancreas	Pancrea
33	chr10:44186800-44190400	Enhancers	HUVEC	blood vessel

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