The 2.0 version of rSNPBase

Variant report

Variant rs12248766
Chromosome Location chr10:61882940-61882941
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:61792200-61883200 Weak transcription Psoas Muscle Psoas
2 chr10:61835400-61883200 Weak transcription Brain Cingulate Gyrus brain
3 chr10:61835600-61883000 Weak transcription Fetal Heart heart
4 chr10:61836000-61893200 Weak transcription Placenta Amnion Placenta Amnion
5 chr10:61841200-61899400 Weak transcription Right Ventricle heart
6 chr10:61846600-61888600 Weak transcription Fetal Kidney kidney
7 chr10:61848000-61900400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr10:61848400-61889800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr10:61857400-61889800 Weak transcription H1 Cell Line embryonic stem cell
10 chr10:61857800-61889600 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr10:61859800-61889800 Weak transcription Duodenum Mucosa Duodenum
12 chr10:61859800-61900200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr10:61860000-61900000 Weak transcription Fetal Brain Male brain
14 chr10:61860600-61883400 Weak transcription Brain Substantia Nigra brain
15 chr10:61863800-61883400 Weak transcription Brain Angular Gyrus brain
16 chr10:61866400-61889800 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr10:61867000-61910200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr10:61867600-61891200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr10:61868800-61889600 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr10:61868800-61891400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr10:61868800-61893000 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr10:61869000-61886600 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr10:61869000-61913200 Weak transcription Primary T cells from cord blood blood
24 chr10:61869200-61895800 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr10:61873400-61883000 Weak transcription Fetal Intestine Large intestine
26 chr10:61873600-61883000 Weak transcription Fetal Intestine Small intestine
27 chr10:61874000-61883200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr10:61874200-61884200 Weak transcription Placenta Placenta
29 chr10:61875000-61889800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr10:61875000-61898800 Weak transcription Rectal Smooth Muscle rectum
31 chr10:61875200-61899400 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr10:61875200-61910800 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr10:61879600-61930200 Weak transcription Primary T cells fromperipheralblood blood
34 chr10:61880000-61893000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr10:61880600-61883000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr10:61881600-61883200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr10:61881800-61883200 Enhancers Muscle Satellite Cultured Cells --
38 chr10:61881800-61884600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr10:61882000-61883200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr10:61882000-61883800 Enhancers Stomach Mucosa stomach
41 chr10:61882000-61883800 Enhancers HSMM muscle
42 chr10:61882000-61884200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr10:61882200-61883400 Weak transcription Esophagus oesophagus
44 chr10:61882200-61883400 Weak transcription Left Ventricle heart
45 chr10:61882200-61900600 Weak transcription Gastric stomach
46 chr10:61882400-61883000 Enhancers A549 lung
47 chr10:61882400-61883400 Weak transcription Right Atrium heart
48 chr10:61882400-61884000 Enhancers NHEK skin
49 chr10:61882400-61884600 Enhancers HMEC breast
50 chr10:61882600-61883200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015