Variant report

Variant	rs12252288
Chromosome Location	chr10:95727560-95727561
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11594688	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11813252	0.83[EUR][1000 genomes]
rs12250130	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12266922	1.00[EUR][1000 genomes]
rs12269634	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7070894	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7075027	1.00[CEU][hapmap]
rs7081067	1.00[CEU][hapmap]
rs7089649	1.00[CEU][hapmap]
rs7911800	1.00[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95719000-95728400	Weak transcription	Fetal Intestine Small	intestine
2	chr10:95719600-95728400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr10:95723600-95728400	Weak transcription	Fetal Muscle Leg	muscle
4	chr10:95726000-95728400	Weak transcription	Right Atrium	heart
5	chr10:95727400-95727600	Enhancers	Psoas Muscle	Psoas
6	chr10:95727400-95727600	Enhancers	Skeletal Muscle Male	skeletal muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links