Variant report
| Variant | rs12263096 |
|---|---|
| Chromosome Location | chr10:25734363-25734364 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:10)
| rs_ID | r2[population] |
|---|---|
| rs11014521 | 1.00[AMR][1000 genomes] |
| rs11014522 | 1.00[AMR][1000 genomes] |
| rs11014556 | 1.00[AMR][1000 genomes] |
| rs11014557 | 1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs11818891 | 1.00[AMR][1000 genomes] |
| rs12241693 | 1.00[AMR][1000 genomes] |
| rs12244297 | 1.00[AMR][1000 genomes] |
| rs12246747 | 1.00[AMR][1000 genomes] |
| rs12261120 | 1.00[AMR][1000 genomes] |
| rs28513297 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv3349863 | chr10:25614571-25946379 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
