Variant report
| Variant | rs12277871 |
|---|---|
| Chromosome Location | chr11:10556261-10556262 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:10502600-10560800 | Weak transcription | Fetal Brain Male | brain |
| 2 | chr11:10522400-10560800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 3 | chr11:10526400-10561600 | Weak transcription | Colonic Mucosa | Colon |
| 4 | chr11:10533200-10561600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 5 | chr11:10533200-10561600 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 6 | chr11:10533400-10561400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 7 | chr11:10533800-10557400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 8 | chr11:10538200-10561600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 9 | chr11:10538400-10561600 | Weak transcription | Esophagus | oesophagus |
| 10 | chr11:10538400-10561600 | Weak transcription | Lung | lung |
| 11 | chr11:10541400-10561600 | Weak transcription | Fetal Heart | heart |
| 12 | chr11:10541600-10561400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 13 | chr11:10541600-10562000 | Weak transcription | Gastric | stomach |
| 14 | chr11:10542200-10561600 | Weak transcription | Fetal Stomach | stomach |
| 15 | chr11:10544200-10561400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 16 | chr11:10546800-10561400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 17 | chr11:10549200-10561600 | Weak transcription | Right Ventricle | heart |
| 18 | chr11:10549400-10560800 | Weak transcription | Aorta | Aorta |
| 19 | chr11:10549400-10560800 | Weak transcription | HSMMtube | muscle |
| 20 | chr11:10549400-10561400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 21 | chr11:10549400-10562000 | Weak transcription | Spleen | Spleen |
| 22 | chr11:10549600-10560600 | Weak transcription | Hela-S3 | cervix |
| 23 | chr11:10549600-10561400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr11:10549600-10561400 | Weak transcription | Fetal Intestine Small | intestine |
| 25 | chr11:10551000-10561600 | Weak transcription | Left Ventricle | heart |
| 26 | chr11:10551200-10559400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 27 | chr11:10551200-10559800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 28 | chr11:10551200-10561400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 29 | chr11:10551200-10561400 | Weak transcription | Fetal Kidney | kidney |
| 30 | chr11:10551200-10561400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 31 | chr11:10551400-10560200 | Weak transcription | A549 | lung |
| 32 | chr11:10551400-10561400 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 33 | chr11:10551400-10561400 | Weak transcription | Fetal Brain Female | brain |
| 34 | chr11:10551400-10561400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 35 | chr11:10551400-10561600 | Weak transcription | Placenta | Placenta |
| 36 | chr11:10551400-10561800 | Weak transcription | Brain Germinal Matrix | brain |
| 37 | chr11:10551600-10557600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 38 | chr11:10551600-10561200 | Weak transcription | HMEC | breast |
| 39 | chr11:10551600-10561400 | Weak transcription | NH-A | brain |
| 40 | chr11:10551600-10561600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 41 | chr11:10551800-10561200 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 42 | chr11:10551800-10561200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 43 | chr11:10551800-10561600 | Weak transcription | Psoas Muscle | Psoas |
| 44 | chr11:10551800-10561800 | Weak transcription | Ovary | ovary |
| 45 | chr11:10552000-10559600 | Weak transcription | Brain Angular Gyrus | brain |
| 46 | chr11:10552000-10561600 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 47 | chr11:10552200-10557000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 48 | chr11:10552200-10561000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 49 | chr11:10552200-10561400 | Weak transcription | NHLF | lung |
| 50 | chr11:10552200-10561600 | Weak transcription | Rectal Smooth Muscle | rectum |
