Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1037363	0.90[ASN][1000 genomes]
rs10838468	0.98[AMR][1000 genomes]
rs11038449	0.91[ASN][1000 genomes]
rs11038453	1.00[ASN][1000 genomes]
rs12270792	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12273702	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12282689	0.98[AMR][1000 genomes]
rs12284900	0.98[AMR][1000 genomes]
rs12286627	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12288173	0.98[AMR][1000 genomes]
rs12418796	0.86[ASN][1000 genomes]
rs1811494	0.90[ASN][1000 genomes]
rs2044871	0.84[ASN][1000 genomes]
rs2863706	0.84[ASN][1000 genomes]
rs34599685	1.00[ASN][1000 genomes]
rs4755983	0.87[ASN][1000 genomes]
rs56944051	1.00[ASN][1000 genomes]
rs57466211	1.00[ASN][1000 genomes]
rs58545924	1.00[ASN][1000 genomes]
rs58957446	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60977164	0.99[ASN][1000 genomes]
rs73456054	1.00[ASN][1000 genomes]
rs974312	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530619	chr11:45294176-45553928	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
2	nsv1045831	chr11:45419113-45580407	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1049520	chr11:45430802-45494235	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
4	nsv541026	chr11:45430802-45494235	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45436400-45456800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:45447800-45462400	Weak transcription	Fetal Brain Male	brain

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