The 2.0 version of rSNPBase

Variant report

Variant rs12283447
Chromosome Location chr11:3982842-3982843
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:3961200-4002000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr11:3970800-3988600 Weak transcription Primary monocytes fromperipheralblood blood
3 chr11:3971400-3988400 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr11:3972800-3988800 Weak transcription Fetal Muscle Leg muscle
5 chr11:3973000-3988600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr11:3973200-3984800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr11:3973200-3993200 Weak transcription Colon Smooth Muscle Colon
8 chr11:3973200-4008400 Weak transcription Fetal Lung lung
9 chr11:3973600-3993800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr11:3974400-3983400 Weak transcription Small Intestine intestine
11 chr11:3974800-3988200 Weak transcription Primary hematopoietic stem cells blood
12 chr11:3974800-3988800 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr11:3975000-4006000 Weak transcription Right Ventricle heart
14 chr11:3975600-3988600 Weak transcription Dnd41 blood
15 chr11:3975600-3988800 Weak transcription Aorta Aorta
16 chr11:3975800-3984800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr11:3975800-3988800 Weak transcription Esophagus oesophagus
18 chr11:3977400-3983000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr11:3977400-3985400 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr11:3977400-3988600 Weak transcription Primary B cells from peripheral blood blood
21 chr11:3979400-3983400 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr11:3980400-3983400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr11:3980400-3984000 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr11:3980600-3984000 Enhancers Primary T killer memory cells from peripheral blood blood
25 chr11:3980600-3988800 Weak transcription GM12878-XiMat blood
26 chr11:3980600-3994200 Weak transcription Fetal Stomach stomach
27 chr11:3981000-3988800 Weak transcription Rectal Smooth Muscle rectum
28 chr11:3981200-3983400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr11:3981200-3983400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr11:3981200-3983400 Weak transcription Thymus Thymus
31 chr11:3981200-3983400 Weak transcription NHLF lung
32 chr11:3981200-3984800 Weak transcription K562 blood
33 chr11:3981200-3990400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr11:3981400-3983800 Enhancers Primary neutrophils fromperipheralblood blood
35 chr11:3981400-3985200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr11:3981600-3988800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr11:3981600-3993000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr11:3981800-3989800 Weak transcription Osteobl bone
39 chr11:3981800-3990800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr11:3982000-3983400 Weak transcription Liver Liver
41 chr11:3982000-3983400 Weak transcription A549 lung
42 chr11:3982000-3984400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr11:3982000-3993200 Weak transcription NHEK skin
44 chr11:3982200-3988800 Weak transcription Spleen Spleen
45 chr11:3982400-3983400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr11:3982400-3983400 Weak transcription Lung lung
47 chr11:3982400-3983800 Weak transcription Adipose Nuclei Adipose
48 chr11:3982400-3994200 Weak transcription Brain Anterior Caudate brain
49 chr11:3982600-3983200 Weak transcription HepG2 liver
50 chr11:3982600-3983400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015