Variant report

Variant rs12281293
Chromosome Location chr11:3963814-3963815
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:3950400-3972200 Weak transcription Fetal Muscle Trunk muscle
2 chr11:3951200-3965400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr11:3951200-3967600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr11:3956200-3964000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr11:3958800-3968000 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr11:3960000-3967600 Enhancers Skeletal Muscle Male skeletal muscle
7 chr11:3960200-3967600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr11:3961000-3964200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:3961200-3964600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr11:3961200-4002000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr11:3961400-3964400 Enhancers Right Atrium heart
12 chr11:3961400-3964800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr11:3961400-3965200 Enhancers Sigmoid Colon Sigmoid Colon
14 chr11:3961400-3968600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr11:3961400-3968600 Enhancers Skeletal Muscle Female skeletal muscle
16 chr11:3961400-3969200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr11:3961600-3966400 Enhancers NHDF-Ad bronchial
18 chr11:3961600-3967600 Weak transcription Brain Angular Gyrus brain
19 chr11:3961600-3967800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr11:3961600-3968000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr11:3961600-3968400 Weak transcription NHEK skin
22 chr11:3961600-3975200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr11:3961800-3964000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr11:3961800-3965600 Weak transcription NHLF lung
25 chr11:3961800-3968000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr11:3962000-3965200 Weak transcription Placenta Amnion Placenta Amnion
27 chr11:3962000-3971800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr11:3962000-3973400 Weak transcription Ovary ovary
29 chr11:3962400-3964000 Enhancers Thymus Thymus
30 chr11:3962400-3968000 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr11:3962400-3968400 Enhancers Primary T regulatory cells fromperipheralblood blood
32 chr11:3962600-3968200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
33 chr11:3963000-3964000 Enhancers Primary T cells fromperipheralblood blood
34 chr11:3963000-3964800 Enhancers Right Ventricle heart
35 chr11:3963000-3966400 Enhancers Psoas Muscle Psoas
36 chr11:3963000-3967000 Enhancers Fetal Thymus thymus
37 chr11:3963000-3968600 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr11:3963000-3973200 Enhancers Primary B cells from peripheral blood blood
39 chr11:3963200-3964400 Flanking Active TSS GM12878-XiMat blood
40 chr11:3963200-3964800 Enhancers Rectal Mucosa Donor 31 rectum
41 chr11:3963200-3965400 Enhancers Liver Liver
42 chr11:3963200-3967800 Enhancers Primary hematopoietic stem cells short term culture blood
43 chr11:3963200-3968400 Enhancers Primary hematopoietic stem cells blood
44 chr11:3963400-3964000 Genic enhancers Esophagus oesophagus
45 chr11:3963400-3964200 Enhancers Placenta Placenta
46 chr11:3963400-3964200 Enhancers Pancreas Pancrea
47 chr11:3963400-3964400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
48 chr11:3963400-3964400 Enhancers Aorta Aorta
49 chr11:3963400-3964400 Enhancers Lung lung
50 chr11:3963400-3964400 Enhancers A549 lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links