The 2.0 version of rSNPBase

Variant report

Variant rs12289477
Chromosome Location chr11:86055472-86055473
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86014200-86057400 Weak transcription Aorta Aorta
2 chr11:86014400-86066600 Weak transcription HSMMtube muscle
3 chr11:86014600-86066400 Weak transcription Fetal Kidney kidney
4 chr11:86014800-86058600 Weak transcription NHLF lung
5 chr11:86015000-86061000 Weak transcription Muscle Satellite Cultured Cells --
6 chr11:86015400-86059600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr11:86020400-86057200 Weak transcription Small Intestine intestine
8 chr11:86022000-86061000 Weak transcription Esophagus oesophagus
9 chr11:86023800-86061200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr11:86024600-86057400 Weak transcription Pancreas Pancrea
11 chr11:86025000-86061600 Weak transcription Psoas Muscle Psoas
12 chr11:86025200-86057800 Weak transcription HepG2 liver
13 chr11:86028400-86059200 Weak transcription Placenta Amnion Placenta Amnion
14 chr11:86032600-86057600 Weak transcription Brain Hippocampus Middle brain
15 chr11:86033400-86066400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:86033600-86057000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr11:86035400-86066600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr11:86035600-86058800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr11:86038000-86059800 Weak transcription NH-A brain
20 chr11:86040800-86060800 Weak transcription Brain Angular Gyrus brain
21 chr11:86042000-86057600 Weak transcription NHDF-Ad bronchial
22 chr11:86047600-86057400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr11:86047600-86059400 Weak transcription NHEK skin
24 chr11:86047800-86067800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr11:86048400-86070200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr11:86048800-86057400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr11:86049400-86057600 Weak transcription Primary hematopoietic stem cells blood
28 chr11:86049400-86067800 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr11:86049600-86056000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:86049600-86057400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr11:86049600-86057400 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:86049600-86057400 Weak transcription Gastric stomach
33 chr11:86049600-86057400 Weak transcription Lung lung
34 chr11:86049600-86057400 Weak transcription Thymus Thymus
35 chr11:86049600-86057400 Weak transcription Spleen Spleen
36 chr11:86049600-86059000 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr11:86049600-86059200 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr11:86049600-86059400 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr11:86049600-86060800 Weak transcription A549 lung
40 chr11:86049600-86062600 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr11:86049600-86065200 Weak transcription Fetal Brain Female brain
42 chr11:86049600-86066400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr11:86049600-86066800 Weak transcription HUVEC blood vessel
44 chr11:86049600-86067600 Weak transcription H1 Cell Line embryonic stem cell
45 chr11:86049800-86055600 Weak transcription K562 blood
46 chr11:86049800-86055800 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr11:86049800-86056000 Weak transcription Dnd41 blood
48 chr11:86049800-86057400 Weak transcription Primary T cells from cord blood blood
49 chr11:86049800-86057400 Weak transcription Liver Liver
50 chr11:86049800-86057400 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015