The 2.0 version of rSNPBase

Variant report

Variant rs12296974
Chromosome Location chr12:47772663-47772664
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:47770400-47773200 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr12:47770600-47773200 Enhancers Adipose Nuclei Adipose
3 chr12:47770600-47773400 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr12:47770800-47773400 Enhancers Liver Liver
5 chr12:47770800-47773600 Enhancers HUVEC blood vessel
6 chr12:47771000-47772800 Enhancers NH-A brain
7 chr12:47771200-47773000 Enhancers HSMM muscle
8 chr12:47771200-47773200 Enhancers Hela-S3 cervix
9 chr12:47771200-47773600 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr12:47771600-47773200 Enhancers Primary T cells from cord blood blood
11 chr12:47771600-47786800 Weak transcription Fetal Brain Male brain
12 chr12:47771800-47772800 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr12:47771800-47772800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr12:47771800-47773000 Enhancers NHEK skin
15 chr12:47771800-47773200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr12:47771800-47774200 Enhancers Primary T helper cells PMA-I stimulated --
17 chr12:47771800-47776200 Weak transcription Lung lung
18 chr12:47772000-47773200 Enhancers Primary B cells from peripheral blood blood
19 chr12:47772000-47773200 Enhancers Primary T helper 17 cells PMA-I stimulated --
20 chr12:47772000-47773400 Enhancers Muscle Satellite Cultured Cells --
21 chr12:47772000-47773400 Enhancers Osteobl bone
22 chr12:47772200-47772800 Enhancers A549 lung
23 chr12:47772200-47773000 Enhancers NHDF-Ad bronchial
24 chr12:47772200-47773200 Enhancers Primary T helper cells fromperipheralblood blood
25 chr12:47772200-47773200 Weak transcription K562 blood
26 chr12:47772200-47773400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr12:47772200-47773400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr12:47772200-47773400 Enhancers Primary T helper naive cells from peripheral blood blood
29 chr12:47772200-47773400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr12:47772200-47773400 Enhancers Primary T killer naive cells fromperipheralblood blood
31 chr12:47772200-47773400 Enhancers Primary T killer memory cells from peripheral blood blood
32 chr12:47772200-47773600 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr12:47772200-47773600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr12:47772200-47777600 Weak transcription Colon Smooth Muscle Colon
35 chr12:47772200-47777600 Weak transcription HMEC breast
36 chr12:47772200-47777800 Weak transcription Right Atrium heart
37 chr12:47772400-47773000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr12:47772400-47773200 Weak transcription Left Ventricle heart
39 chr12:47772400-47773600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr12:47772400-47777600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr12:47772400-47777600 Weak transcription Rectal Smooth Muscle rectum
42 chr12:47772400-47777600 Weak transcription HSMMtube muscle
43 chr12:47772400-47777800 Weak transcription Ovary ovary
44 chr12:47772600-47773000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr12:47772600-47773000 Enhancers Sigmoid Colon Sigmoid Colon
46 chr12:47772600-47773400 Enhancers Primary hematopoietic stem cells blood
47 chr12:47772600-47773400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:47772600-47773600 Enhancers Dnd41 blood

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Last update: Aug 31, 2015