The 2.0 version of rSNPBase

Variant report

Variant rs12321759
Chromosome Location chr12:47771352-47771353
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:47762800-47771800 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr12:47763200-47772200 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr12:47763200-47772200 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr12:47766600-47772200 Weak transcription Primary T helper naive cells from peripheral blood blood
5 chr12:47770400-47773200 Enhancers Breast Myoepithelial Primary Cells Breast
6 chr12:47770600-47771400 Enhancers K562 blood
7 chr12:47770600-47772400 Enhancers Rectal Smooth Muscle rectum
8 chr12:47770600-47773200 Enhancers Adipose Nuclei Adipose
9 chr12:47770600-47773400 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr12:47770800-47771400 Enhancers NHLF lung
11 chr12:47770800-47771800 Enhancers Lung lung
12 chr12:47770800-47771800 Enhancers NHDF-Ad bronchial
13 chr12:47770800-47772200 Enhancers Brain Hippocampus Middle brain
14 chr12:47770800-47772200 Enhancers Right Atrium heart
15 chr12:47770800-47772400 Enhancers Cortex derived primary cultured neurospheres brain
16 chr12:47770800-47772400 Enhancers Ovary ovary
17 chr12:47770800-47773400 Enhancers Liver Liver
18 chr12:47770800-47773600 Enhancers HUVEC blood vessel
19 chr12:47771000-47771400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr12:47771000-47771600 Enhancers Fetal Brain Male brain
21 chr12:47771000-47772000 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr12:47771000-47772200 Enhancers HMEC breast
23 chr12:47771000-47772400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr12:47771000-47772400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr12:47771000-47772800 Enhancers NH-A brain
26 chr12:47771200-47771400 Flanking Active TSS Muscle Satellite Cultured Cells --
27 chr12:47771200-47771400 Flanking Active TSS Brain Anterior Caudate brain
28 chr12:47771200-47771400 Active TSS Brain Inferior Temporal Lobe brain
29 chr12:47771200-47771400 Active TSS Skeletal Muscle Male skeletal muscle
30 chr12:47771200-47771400 Flanking Active TSS Osteobl bone
31 chr12:47771200-47771600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr12:47771200-47771600 Flanking Active TSS Brain Cingulate Gyrus brain
33 chr12:47771200-47771600 Enhancers Colon Smooth Muscle Colon
34 chr12:47771200-47771600 Flanking Active TSS Fetal Lung lung
35 chr12:47771200-47771600 Enhancers HSMMtube muscle
36 chr12:47771200-47771800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
37 chr12:47771200-47771800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr12:47771200-47771800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr12:47771200-47771800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
40 chr12:47771200-47771800 Active TSS Stomach Smooth Muscle stomach
41 chr12:47771200-47771800 Flanking Active TSS NHEK skin
42 chr12:47771200-47772000 Enhancers Fetal Heart heart
43 chr12:47771200-47772200 Flanking Active TSS A549 lung
44 chr12:47771200-47772400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr12:47771200-47772400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr12:47771200-47773000 Enhancers HSMM muscle
47 chr12:47771200-47773200 Enhancers Hela-S3 cervix
48 chr12:47771200-47773600 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015