The 2.0 version of rSNPBase

Variant report

Variant rs12300998
Chromosome Location chr12:49623089-49623090
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49610200-49625800 Weak transcription Stomach Smooth Muscle stomach
2 chr12:49615200-49625600 Weak transcription Placenta Placenta
3 chr12:49616800-49624400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr12:49616800-49625800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr12:49616800-49626000 Weak transcription Adipose Nuclei Adipose
6 chr12:49617000-49624000 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr12:49617600-49625600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr12:49617600-49625800 Weak transcription NHDF-Ad bronchial
9 chr12:49617600-49626000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr12:49619200-49624000 Weak transcription Primary B cells from cord blood blood
11 chr12:49619800-49624600 Weak transcription HSMM muscle
12 chr12:49619800-49627200 Weak transcription Lung lung
13 chr12:49620000-49623400 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr12:49620000-49624000 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr12:49620000-49626000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr12:49620200-49623200 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr12:49620200-49623400 Weak transcription Primary monocytes fromperipheralblood blood
18 chr12:49621200-49625400 Weak transcription Fetal Muscle Trunk muscle
19 chr12:49621400-49623400 Active TSS Fetal Brain Female brain
20 chr12:49621800-49624000 Weak transcription Fetal Muscle Leg muscle
21 chr12:49622000-49624000 Weak transcription HSMMtube muscle
22 chr12:49622000-49625600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr12:49622000-49625600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr12:49622000-49625600 Weak transcription Brain Anterior Caudate brain
25 chr12:49622000-49625600 Weak transcription Brain Inferior Temporal Lobe brain
26 chr12:49622000-49625600 Weak transcription Brain Substantia Nigra brain
27 chr12:49622000-49625800 Weak transcription Brain Hippocampus Middle brain
28 chr12:49622200-49625400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr12:49622200-49625600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr12:49622200-49625600 Weak transcription Brain Cingulate Gyrus brain
31 chr12:49622400-49623400 Enhancers K562 blood
32 chr12:49622400-49623800 Active TSS Brain Germinal Matrix brain
33 chr12:49622600-49625600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr12:49622600-49625600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr12:49622600-49625600 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr12:49622800-49625600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr12:49622800-49625600 Weak transcription Brain Angular Gyrus brain
38 chr12:49622800-49627000 Weak transcription H9 Cell Line embryonic stem cell
39 chr12:49623000-49623400 Enhancers Fetal Brain Male brain
40 chr12:49623000-49627800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015