Variant report
| Variant | rs11168942 |
|---|---|
| Chromosome Location | chr12:49656935-49656936 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49629400-49657800 | Weak transcription | Fetal Stomach | stomach |
| 2 | chr12:49650000-49657200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 3 | chr12:49650000-49658000 | Weak transcription | Right Atrium | heart |
| 4 | chr12:49652200-49658000 | Weak transcription | Fetal Brain Female | brain |
| 5 | chr12:49653200-49657000 | Enhancers | NHDF-Ad | bronchial |
| 6 | chr12:49653600-49658000 | Weak transcription | Fetal Kidney | kidney |
| 7 | chr12:49654200-49658000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 8 | chr12:49654400-49657000 | Weak transcription | Hela-S3 | cervix |
| 9 | chr12:49654400-49657000 | Weak transcription | HSMM | muscle |
| 10 | chr12:49654400-49657200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 11 | chr12:49654400-49657200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 12 | chr12:49654400-49657400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 13 | chr12:49654400-49657400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 14 | chr12:49654600-49657000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr12:49654600-49657000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 16 | chr12:49654600-49657000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 17 | chr12:49654600-49657000 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 18 | chr12:49654600-49657200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 19 | chr12:49654600-49657200 | Weak transcription | Adipose Nuclei | Adipose |
| 20 | chr12:49654600-49657400 | Enhancers | Osteobl | bone |
| 21 | chr12:49654600-49657800 | Weak transcription | Fetal Lung | lung |
| 22 | chr12:49654600-49658000 | Weak transcription | Aorta | Aorta |
| 23 | chr12:49654800-49657000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 24 | chr12:49654800-49657200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 25 | chr12:49654800-49657200 | Weak transcription | HMEC | breast |
| 26 | chr12:49654800-49657200 | Weak transcription | HUVEC | blood vessel |
| 27 | chr12:49654800-49657400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 28 | chr12:49654800-49657600 | Weak transcription | Primary B cells from cord blood | blood |
| 29 | chr12:49654800-49657800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 30 | chr12:49654800-49658000 | Weak transcription | Ovary | ovary |
| 31 | chr12:49655000-49657200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 32 | chr12:49655000-49658000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 33 | chr12:49655000-49658200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 34 | chr12:49655600-49657000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 35 | chr12:49655600-49657000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 36 | chr12:49655600-49657000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 37 | chr12:49655800-49657000 | Weak transcription | A549 | lung |
| 38 | chr12:49655800-49657000 | Weak transcription | K562 | blood |
| 39 | chr12:49655800-49657200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 40 | chr12:49655800-49657400 | Enhancers | Fetal Thymus | thymus |
| 41 | chr12:49656000-49657000 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 42 | chr12:49656000-49657000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 43 | chr12:49656000-49657000 | Weak transcription | NH-A | brain |
| 44 | chr12:49656000-49657000 | Weak transcription | NHEK | skin |
| 45 | chr12:49656000-49657000 | Weak transcription | NHLF | lung |
| 46 | chr12:49656000-49657600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 47 | chr12:49656200-49657000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 48 | chr12:49656400-49657400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 49 | chr12:49656600-49657000 | Enhancers | GM12878-XiMat | blood |
| 50 | chr12:49656800-49657000 | Flanking Active TSS | Foreskin Fibroblast Primary Cells skin02 | Skin |
