Variant report
| Variant | rs3759170 |
|---|---|
| Chromosome Location | chr12:49661297-49661298 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49658000-49661400 | Active TSS | HSMMtube | muscle |
| 2 | chr12:49658000-49661600 | Active TSS | Esophagus | oesophagus |
| 3 | chr12:49659000-49663200 | Transcr. at gene 5' and 3' | A549 | lung |
| 4 | chr12:49659200-49673600 | Weak transcription | Fetal Brain Male | brain |
| 5 | chr12:49659400-49661800 | Weak transcription | Brain Substantia Nigra | brain |
| 6 | chr12:49659400-49664200 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 7 | chr12:49659600-49661600 | Transcr. at gene 5' and 3' | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr12:49659600-49661800 | Transcr. at gene 5' and 3' | Muscle Satellite Cultured Cells | -- |
| 9 | chr12:49659600-49662000 | Transcr. at gene 5' and 3' | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 10 | chr12:49659600-49663200 | Weak transcription | Fetal Brain Female | brain |
| 11 | chr12:49659600-49663400 | Weak transcription | Ovary | ovary |
| 12 | chr12:49659600-49663800 | Weak transcription | Brain Germinal Matrix | brain |
| 13 | chr12:49659600-49664800 | Weak transcription | Fetal Lung | lung |
| 14 | chr12:49659600-49668600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 15 | chr12:49659600-49669600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 16 | chr12:49659600-49673600 | Weak transcription | Brain Hippocampus Middle | brain |
| 17 | chr12:49659800-49661400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 18 | chr12:49659800-49661600 | Transcr. at gene 5' and 3' | IMR90 fetal lung fibroblasts Cell Line | lung |
| 19 | chr12:49659800-49661600 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 20 | chr12:49659800-49661600 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 21 | chr12:49659800-49661600 | Transcr. at gene 5' and 3' | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 22 | chr12:49659800-49661600 | Enhancers | Fetal Heart | heart |
| 23 | chr12:49659800-49662000 | Transcr. at gene 5' and 3' | HMEC | breast |
| 24 | chr12:49659800-49662200 | Weak transcription | Primary T cells from cord blood | blood |
| 25 | chr12:49659800-49662200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 26 | chr12:49659800-49662200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 27 | chr12:49659800-49662400 | Weak transcription | Brain Anterior Caudate | brain |
| 28 | chr12:49659800-49662600 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 29 | chr12:49659800-49662600 | Weak transcription | Fetal Kidney | kidney |
| 30 | chr12:49659800-49663000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 31 | chr12:49659800-49663200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 32 | chr12:49659800-49663600 | Weak transcription | Primary B cells from cord blood | blood |
| 33 | chr12:49659800-49663600 | Weak transcription | Aorta | Aorta |
| 34 | chr12:49659800-49663600 | Weak transcription | Colon Smooth Muscle | Colon |
| 35 | chr12:49659800-49663800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 36 | chr12:49659800-49668600 | Weak transcription | Right Atrium | heart |
| 37 | chr12:49660000-49661400 | Enhancers | Primary T cells fromperipheralblood | blood |
| 38 | chr12:49660000-49661400 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 39 | chr12:49660000-49661600 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 40 | chr12:49660000-49661600 | Enhancers | Pancreas | Pancrea |
| 41 | chr12:49660000-49662000 | Transcr. at gene 5' and 3' | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 42 | chr12:49660000-49662000 | Enhancers | Liver | Liver |
| 43 | chr12:49660000-49662000 | Enhancers | Lung | lung |
| 44 | chr12:49660000-49662000 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 45 | chr12:49660000-49662200 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 46 | chr12:49660000-49662600 | Weak transcription | Fetal Muscle Leg | muscle |
| 47 | chr12:49660000-49663000 | Enhancers | Adipose Nuclei | Adipose |
| 48 | chr12:49660000-49663200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 49 | chr12:49660200-49661600 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 50 | chr12:49660200-49661800 | Transcr. at gene 5' and 3' | HUES6 Cell Line | embryonic stem cell |
