Variant report

Variant	rs12302952
Chromosome Location	chr12:120858971-120858972
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11065103	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11834189	0.80[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12227457	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1732847	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1794741	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs2701634	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2701635	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2859282	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3498596	chr12:120858938-120859368	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3498607	chr12:120858938-120859368	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:120827200-120875200	Weak transcription	Right Atrium	heart
2	chr12:120852400-120875200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr12:120856400-120866400	Weak transcription	Fetal Intestine Small	intestine
4	chr12:120858000-120862400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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