Variant report
| Variant | rs12306721 |
|---|---|
| Chromosome Location | chr12:62251534-62251535 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs11174135 | 1.00[EUR][1000 genomes] |
| rs11174151 | 1.00[EUR][1000 genomes] |
| rs11174156 | 1.00[EUR][1000 genomes] |
| rs11174167 | 1.00[EUR][1000 genomes] |
| rs11174170 | 1.00[EUR][1000 genomes] |
| rs11174171 | 1.00[EUR][1000 genomes] |
| rs11174178 | 1.00[EUR][1000 genomes] |
| rs11174179 | 1.00[EUR][1000 genomes] |
| rs11174206 | 1.00[EUR][1000 genomes] |
| rs12301609 | 1.00[EUR][1000 genomes] |
| rs12301651 | 1.00[EUR][1000 genomes] |
| rs12302070 | 1.00[EUR][1000 genomes] |
| rs12302650 | 1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs12305869 | 1.00[EUR][1000 genomes] |
| rs12307176 | 1.00[EUR][1000 genomes] |
| rs12307906 | 1.00[EUR][1000 genomes] |
| rs12308834 | 1.00[EUR][1000 genomes] |
| rs12310261 | 1.00[EUR][1000 genomes] |
| rs12310815 | 1.00[EUR][1000 genomes] |
| rs12310971 | 1.00[EUR][1000 genomes] |
| rs12311143 | 1.00[EUR][1000 genomes] |
| rs12312418 | 1.00[EUR][1000 genomes] |
| rs12313937 | 1.00[EUR][1000 genomes] |
| rs12314551 | 1.00[EUR][1000 genomes] |
| rs12316239 | 1.00[EUR][1000 genomes] |
| rs12319647 | 1.00[EUR][1000 genomes] |
| rs12319917 | 1.00[EUR][1000 genomes] |
| rs12320238 | 1.00[EUR][1000 genomes] |
| rs12320387 | 1.00[EUR][1000 genomes] |
| rs12320743 | 1.00[EUR][1000 genomes] |
| rs12322039 | 1.00[EUR][1000 genomes] |
| rs2359976 | 1.00[EUR][1000 genomes] |
| rs7137620 | 1.00[EUR][1000 genomes] |
| rs7294889 | 1.00[EUR][1000 genomes] |
| rs7297714 | 1.00[EUR][1000 genomes] |
| rs7299621 | 1.00[EUR][1000 genomes] |
| rs7301639 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7314886 | 1.00[EUR][1000 genomes] |
| rs7980919 | 1.00[EUR][1000 genomes] |
| rs9651985 | 1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1039741 | chr12:62046850-62491052 | Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:62251200-62252200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 2 | chr12:62251400-62252200 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
