Variant report

Variant rs12306857
Chromosome Location chr12:749391-749392
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:733000-750600 Weak transcription Spleen Spleen
2 chr12:740000-751600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr12:741000-751400 Enhancers Primary monocytes fromperipheralblood blood
4 chr12:742000-751800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr12:742200-751000 Weak transcription Fetal Muscle Trunk muscle
6 chr12:742200-751200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr12:742200-751400 Weak transcription H9 Cell Line embryonic stem cell
8 chr12:742200-751400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr12:742200-751600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr12:742400-749600 Weak transcription Brain Hippocampus Middle brain
11 chr12:742400-751600 Weak transcription Right Ventricle heart
12 chr12:742400-752200 Weak transcription Brain Substantia Nigra brain
13 chr12:742600-751600 Weak transcription Right Atrium heart
14 chr12:742600-751800 Weak transcription Esophagus oesophagus
15 chr12:743400-751200 Weak transcription Adipose Nuclei Adipose
16 chr12:743400-751200 Weak transcription Liver Liver
17 chr12:745600-751600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr12:745800-750400 Enhancers Primary hematopoietic stem cells blood
19 chr12:745800-751600 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr12:746000-751200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr12:746200-751800 Enhancers Primary B cells from cord blood blood
22 chr12:746800-749400 Enhancers Primary T cells from cord blood blood
23 chr12:747000-751400 Enhancers Primary T cells fromperipheralblood blood
24 chr12:747000-751400 Enhancers Primary T helper cells fromperipheralblood blood
25 chr12:747000-751600 Enhancers Fetal Thymus thymus
26 chr12:747200-750400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr12:747200-751600 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr12:747400-751200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr12:747400-751200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr12:747400-751400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr12:747400-751600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr12:747400-752200 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr12:747400-754000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr12:747600-749800 Weak transcription NHEK skin
35 chr12:747600-751000 Weak transcription A549 lung
36 chr12:747600-751600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr12:747600-751800 Weak transcription HMEC breast
38 chr12:747800-749400 Enhancers Primary B cells from peripheral blood blood
39 chr12:747800-749400 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr12:747800-749400 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr12:747800-750000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
42 chr12:747800-750400 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr12:748000-749600 Enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr12:748000-749600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr12:748000-751000 Weak transcription Placenta Placenta
46 chr12:748000-751200 Enhancers Primary T regulatory cells fromperipheralblood blood
47 chr12:748200-750400 Enhancers Skeletal Muscle Male skeletal muscle
48 chr12:748400-750000 Enhancers Skeletal Muscle Female skeletal muscle
49 chr12:748600-749400 Enhancers Primary mononuclear cells fromperipheralblood Blood
50 chr12:748600-749400 Flanking Active TSS GM12878-XiMat blood

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