The 2.0 version of rSNPBase

Variant report

Variant rs12311104
Chromosome Location chr12:118786278-118786279
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:118720800-118793600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr12:118768800-118790400 Weak transcription Primary T cells from cord blood blood
3 chr12:118769200-118791000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:118774000-118792400 Weak transcription Dnd41 blood
5 chr12:118775800-118792000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr12:118775800-118792600 Weak transcription Muscle Satellite Cultured Cells --
7 chr12:118776200-118792000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr12:118777000-118791000 Weak transcription NHDF-Ad bronchial
9 chr12:118780000-118790400 Weak transcription Liver Liver
10 chr12:118781000-118793600 Weak transcription NHEK skin
11 chr12:118782000-118786600 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr12:118783400-118789400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr12:118783400-118791000 Weak transcription NHLF lung
14 chr12:118783600-118792200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr12:118783600-118793000 Weak transcription Osteobl bone
16 chr12:118783600-118794400 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr12:118784200-118793600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr12:118784400-118786600 Enhancers Fetal Intestine Large intestine
19 chr12:118784800-118786800 Enhancers Small Intestine intestine
20 chr12:118784800-118788000 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr12:118785000-118786800 Enhancers Fetal Intestine Small intestine
22 chr12:118785000-118792600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr12:118785000-118794600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr12:118785200-118786600 Enhancers Sigmoid Colon Sigmoid Colon
25 chr12:118785400-118786400 Enhancers HepG2 liver
26 chr12:118785400-118786800 Enhancers Primary hematopoietic stem cells blood
27 chr12:118785400-118790600 Weak transcription Primary T cells fromperipheralblood blood
28 chr12:118785400-118790600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
29 chr12:118785400-118792200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr12:118785400-118793000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr12:118785400-118794600 Weak transcription Aorta Aorta
32 chr12:118785600-118789000 Weak transcription Monocytes-CD14+_RO01746 blood
33 chr12:118785600-118791000 Weak transcription Primary B cells from cord blood blood
34 chr12:118785800-118787200 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr12:118786000-118787000 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr12:118786000-118790600 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr12:118786000-118791000 Weak transcription Primary monocytes fromperipheralblood blood
38 chr12:118786000-118791200 Weak transcription Brain Substantia Nigra brain
39 chr12:118786000-118791400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr12:118786000-118793400 Weak transcription Brain Inferior Temporal Lobe brain
41 chr12:118786000-118794400 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr12:118786200-118787000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr12:118786200-118787800 Weak transcription GM12878-XiMat blood
44 chr12:118786200-118789000 Weak transcription Duodenum Mucosa Duodenum
45 chr12:118786200-118791000 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr12:118786200-118791000 Weak transcription Brain Angular Gyrus brain
47 chr12:118786200-118791000 Weak transcription K562 blood
48 chr12:118786200-118791200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr12:118786200-118791400 Weak transcription A549 lung
50 chr12:118786200-118791600 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015