Variant report

Variant	rs12321292
Chromosome Location	chr12:67908949-67908950
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr12:67908775-67908960	HepG2	liver:	n/a	n/a
2	CEBPB	chr12:67908770-67908967	K562	blood:	n/a	n/a

Variant related genes	Relation type
ENSG00000203585	TF binding region

rs_ID	r²[population]
rs10128823	1.00[EUR][1000 genomes]
rs10129028	1.00[EUR][1000 genomes]
rs11176679	1.00[EUR][1000 genomes]
rs11176684	1.00[EUR][1000 genomes]
rs11176691	1.00[EUR][1000 genomes]
rs11176692	1.00[EUR][1000 genomes]
rs11176693	1.00[EUR][1000 genomes]
rs11176694	1.00[EUR][1000 genomes]
rs11176715	1.00[EUR][1000 genomes]
rs11176740	1.00[EUR][1000 genomes]
rs11176784	1.00[EUR][1000 genomes]
rs12297966	1.00[EUR][1000 genomes]
rs12300582	1.00[EUR][1000 genomes]
rs12303089	1.00[EUR][1000 genomes]
rs12306375	1.00[EUR][1000 genomes]
rs12307363	1.00[EUR][1000 genomes]
rs12307464	1.00[EUR][1000 genomes]
rs12309271	1.00[EUR][1000 genomes]
rs12311491	1.00[EUR][1000 genomes]
rs12311797	1.00[EUR][1000 genomes]
rs12311840	1.00[EUR][1000 genomes]
rs12311845	1.00[EUR][1000 genomes]
rs12312040	1.00[EUR][1000 genomes]
rs12314503	1.00[EUR][1000 genomes]
rs12318518	1.00[EUR][1000 genomes]
rs12318591	1.00[EUR][1000 genomes]
rs12320566	1.00[EUR][1000 genomes]
rs17103772	1.00[EUR][1000 genomes]
rs17120707	1.00[EUR][1000 genomes]
rs17120710	1.00[EUR][1000 genomes]
rs4083304	1.00[EUR][1000 genomes]
rs57886620	1.00[EUR][1000 genomes]
rs58828387	1.00[EUR][1000 genomes]
rs61504642	1.00[EUR][1000 genomes]
rs6581751	1.00[EUR][1000 genomes]
rs7135195	1.00[EUR][1000 genomes]
rs7138362	1.00[EUR][1000 genomes]
rs7294827	1.00[EUR][1000 genomes]
rs7306853	1.00[EUR][1000 genomes]
rs7307643	1.00[EUR][1000 genomes]
rs7312079	1.00[EUR][1000 genomes]
rs73322616	1.00[EUR][1000 genomes]
rs73326445	1.00[EUR][1000 genomes]
rs73326448	1.00[EUR][1000 genomes]
rs73326466	1.00[EUR][1000 genomes]
rs7964763	1.00[EUR][1000 genomes]
rs7977574	1.00[EUR][1000 genomes]
rs9989007	1.00[EUR][1000 genomes]
rs9989023	1.00[EUR][1000 genomes]

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:67903000-67910600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr12:67903200-67911000	Weak transcription	Right Atrium	heart
3	chr12:67904800-67909000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
4	chr12:67905200-67911200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
5	chr12:67905400-67909400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
6	chr12:67905400-67911200	Enhancers	Primary T helper cells PMA-I stimulated	--
7	chr12:67905400-67911600	Enhancers	Fetal Thymus	thymus
8	chr12:67905600-67909400	Enhancers	Primary T cells from cord blood	blood
9	chr12:67906000-67910000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr12:67906200-67909000	Enhancers	Dnd41	blood
11	chr12:67906400-67909200	Weak transcription	HSMM	muscle
12	chr12:67907000-67909200	Weak transcription	HSMMtube	muscle
13	chr12:67907400-67909200	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr12:67907600-67909000	Enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr12:67907600-67909000	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
16	chr12:67907600-67909000	Weak transcription	Psoas Muscle	Psoas
17	chr12:67907800-67909000	Enhancers	Primary T killer memory cells from peripheral blood	blood
18	chr12:67908000-67909200	Enhancers	Primary T regulatory cells fromperipheralblood	blood
19	chr12:67908000-67909400	Enhancers	Primary T cells fromperipheralblood	blood
20	chr12:67908000-67910400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr12:67908000-67911200	Enhancers	Primary T helper cells fromperipheralblood	blood
22	chr12:67908000-67911400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
23	chr12:67908000-67911400	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr12:67908400-67909000	Enhancers	Stomach Mucosa	stomach
25	chr12:67908400-67909800	Enhancers	Fetal Intestine Large	intestine
26	chr12:67908400-67910200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
27	chr12:67908400-67911800	Enhancers	Fetal Brain Female	brain
28	chr12:67908600-67909000	Enhancers	iPS-15b Cell Line	embryonic stem cell
29	chr12:67908600-67909200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr12:67908600-67909200	Enhancers	Fetal Lung	lung
31	chr12:67908600-67909400	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
32	chr12:67908600-67909600	Enhancers	Thymus	Thymus
33	chr12:67908600-67910600	Enhancers	Colon Smooth Muscle	Colon
34	chr12:67908600-67911200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
35	chr12:67908600-67911600	Enhancers	Fetal Brain Male	brain
36	chr12:67908800-67909000	Enhancers	Cortex derived primary cultured neurospheres	brain
37	chr12:67908800-67909000	Enhancers	Duodenum Mucosa	Duodenum
38	chr12:67908800-67909000	Enhancers	Rectal Mucosa Donor 31	rectum
39	chr12:67908800-67909200	Enhancers	Rectal Mucosa Donor 29	rectum
40	chr12:67908800-67909400	Enhancers	Lung	lung
41	chr12:67908800-67909600	Enhancers	Esophagus	oesophagus
42	chr12:67908800-67909600	Enhancers	Stomach Smooth Muscle	stomach
43	chr12:67908800-67909800	Enhancers	Primary hematopoietic stem cells short term culture	blood
44	chr12:67908800-67909800	Enhancers	Fetal Stomach	stomach
45	chr12:67908800-67910000	Enhancers	Fetal Intestine Small	intestine
46	chr12:67908800-67910000	Enhancers	Small Intestine	intestine
47	chr12:67908800-67910200	Enhancers	Primary hematopoietic stem cells	blood
48	chr12:67908800-67910200	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
49	chr12:67908800-67910400	Enhancers	Fetal Muscle Leg	muscle
50	chr12:67908800-67910800	Enhancers	Gastric	stomach

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